Download CGGA Data
*It was updated on November 28, 2019, and
older versions is available
here.
We have been working on this update for the past
one month, and are excited to re-classified the samples according to
the 2016 WHO classification system (About identification of IDH
mutation and 1p/19 codel status, please see Method). However, some tumor
samples have been collected for a long time, especially those from
microarray data, so the lack of molecular pathological information
makes it impossible to update. So, we have retained the previous
subtypes in this sample.
| Part A |
| DataSet ID: WESeq_286 |
| Data type: Whole-exome sequencing |
| Platform: Agilent SureSelect kit v5.4 &
Illumina HiSeq 4,000 |
| Total number of samples: 286 |
Publications:
1.
Hu, H., Mu, Q., Bao, Z., Chen, Y., Liu, Y., Chen, J., Wang, K.,
Wang, Z., Nam, Y., Jiang, B., et al. (2018). Mutational
Landscape of Secondary Glioblastoma Guides MET-Targeted Trial in
Brain Tumor. Cell 175, 1665-1678 e1618. |
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|
| Part B |
| DataSet ID: mRNAseq_693 |
| Data type: mRNA sequencing |
| Platform: Illumina HiSeq |
| Total number of samples: 693 |
| Download
|
| Part C |
| DataSet ID: mRNAseq_325 |
| Data type: mRNA sequencing |
| Platform: Illumina HiSeq 2000 or 2500 |
| Total number of samples: 325 |
Publications:
1. Bao, Z.S., Chen, H.M., Yang, M.Y., Zhang,
C.B., Yu, K., Ye, W.L., Hu, B.Q., Yan, W., Zhang, W., Akers, J.,
et al. (2014). RNA-seq of 272 gliomas revealed a novel,
recurrent PTPRZ1-MET fusion transcript in secondary
glioblastomas. Genome research 24, 1765-1773
2. Zhao, Z., Meng, F., Wang, W., Wang, Z.,
Zhang, C., and Jiang, T. (2017). Comprehensive RNA-seq
transcriptomic profiling in the malignant progression of
gliomas. Scientific data 4, 170024 |
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|
*Browse the 'About' section for details of
data processing