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Output - mRNA data (correlation)
Dataset:
mRNAseq_693
Gene A:
CDKN2A
Gene B:
CDKN2B
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CGGA.ID PRS.type Histology Grade Gender OS Censor Age IDH.mutation.status 1p19q.codel.status Gene.A.Expression Gene.B.Expression CGGA_1002 Primary AA WHO III Female 305 1 43 Wildtype Non-codel 12.85 0.45 CGGA_1003 Primary O WHO II Female 3817 0 47 Mutant Codel 17.01 3.16 CGGA_1010 Primary A WHO II Male 246 1 45 Mutant NA 3.18 0.84 CGGA_1012 Recurrent rO WHO II Male 3679 1 45 Mutant Non-codel 7.21 2.64 CGGA_1014 Primary A WHO II Male 263 1 42 Wildtype Non-codel 5.54 0.38 CGGA_1017 Primary GBM WHO IV Female 768 1 29 Wildtype Non-codel 2.31 1.02 CGGA_1018 Recurrent rO WHO II Male 2527 1 50 Mutant Codel 45.7 1.27 CGGA_103 Primary AA WHO III Male 1188 1 56 Mutant Non-codel 53.02 10.46 CGGA_1030 Primary A WHO II Female 3664 0 40 Mutant Non-codel 12.28 1.83 CGGA_1032 Primary A WHO II Female 643 1 41 Wildtype NA 4.63 3.37 CGGA_1033 Primary OA WHO II Male 1322 0 44 NA Non-codel 5.24 0.46 CGGA_1036 Primary GBM WHO IV Male 806 1 41 Wildtype Non-codel 4.62 1.71 CGGA_1037 Primary A WHO II Male 780 0 44 NA Codel 15.63 0.64 CGGA_1041 Primary GBM WHO IV Male 3593 0 58 Wildtype Non-codel 12.72 2.59 CGGA_1048 Primary A WHO II Female 703 0 27 Wildtype Non-codel 497.81 24.75 CGGA_1051 Primary A WHO II Male 838 1 47 Wildtype Codel 5.18 0.62 CGGA_1055 Primary AA WHO III Male 1611 1 43 Mutant Non-codel 11.55 3.78 CGGA_1057 Primary A WHO II Female 1549 1 57 Wildtype Non-codel 35.12 1.16 CGGA_1058 Recurrent rA WHO II Male 995 1 34 Mutant Non-codel 152.47 9.97 CGGA_106 Recurrent rA WHO II Male 5028 0 30 Wildtype Non-codel 19.13 1.85 CGGA_1063 Primary A WHO II Male NA NA 29 Mutant NA 4.83 0.84 CGGA_1065 Primary O WHO II Female 3412 0 48 Mutant Codel 40.49 1.23 CGGA_1066 Primary A WHO II Female 723 1 34 Mutant Non-codel 89.15 25.15 CGGA_1069 Recurrent rA WHO II Male NA NA 47 Mutant Non-codel 19 20.14 CGGA_107 Recurrent rAA WHO III Female 2156 1 38 Wildtype Non-codel 3.21 2.3 CGGA_1075 Primary GBM WHO IV Male 398 1 72 Wildtype Non-codel 382.33 3.9 CGGA_108 Recurrent rAA WHO III Male 366 1 44 Wildtype Non-codel 2.82 0.97 CGGA_1082 Primary A WHO II Female NA NA 55 Mutant Non-codel 50.22 1.89 CGGA_1086 Primary GBM WHO IV Female 1977 1 65 Wildtype NA 1.67 0.54 CGGA_1087 Primary O WHO II Female 701 0 36 Mutant Codel 64.78 5.39 CGGA_1097 Primary A WHO II Male 1378 1 30 Wildtype Non-codel 2.27 14.91 CGGA_1100 Primary O WHO II Female 3314 0 61 Mutant NA 2.44 0.37 CGGA_1101 Primary A WHO II Female 214 1 35 Wildtype NA 0.52 0.03 CGGA_1103 Primary GBM WHO IV Female 585 1 35 Mutant Non-codel 187.53 13.41 CGGA_1106 Primary GBM WHO IV Male 420 1 37 Wildtype Non-codel 3.55 0.64 CGGA_1108 Primary AA WHO III Female 684 1 39 Wildtype Non-codel 55.95 12.97 CGGA_1111 Primary AA WHO III Male 2696 1 45 Mutant Non-codel 632.05 5.09 CGGA_112 Primary A WHO II Male 1534 1 17 Mutant Non-codel 35.41 1.74 CGGA_1120 Primary AOA WHO III Female 422 1 58 Mutant NA 2.91 1.01 CGGA_1121 Recurrent rAA WHO III Female 3278 0 29 Mutant Non-codel 75.23 3.27 CGGA_1126 Primary AA WHO III Male 784 1 44 Mutant Non-codel 19.51 1.18 CGGA_1127 Primary O WHO II Male 2630 1 33 NA Codel 18.6 0.82 CGGA_1130 Recurrent rGBM WHO IV Female 402 1 23 Mutant Non-codel 44.59 1.14 CGGA_1131 Primary AA WHO III Female 3251 0 46 Mutant Non-codel 67.06 12.7 CGGA_1132 Recurrent rAO WHO III Female 3251 0 33 Mutant Codel 49.6 7.51 CGGA_1134 Primary GBM WHO IV Female 59 1 56 Wildtype Non-codel 4.23 1.16 CGGA_1135 Primary GBM WHO IV Male 1244 1 40 Wildtype Non-codel 454.74 17.53 CGGA_1137 Primary AA WHO III Male 3237 0 58 Wildtype NA 0.95 0.66 CGGA_1138 Primary GBM WHO IV Male 411 1 54 Wildtype Non-codel 206.86 5.75 CGGA_1141 Primary AA WHO III Male 432 1 65 Wildtype Non-codel 10.07 1.27 CGGA_1142 Primary GBM WHO IV Male 1005 1 60 Wildtype Non-codel 407.73 34.87 CGGA_1144 Primary AA WHO III Female 2505 0 39 Wildtype Non-codel 3.95 0.93 CGGA_1147 Primary A WHO II Male 3215 0 36 Mutant Non-codel 3.01 3.82 CGGA_1148 Primary A WHO II Male 596 1 37 Mutant Non-codel 6.32 0.57 CGGA_1152 Primary A WHO II Male 3201 0 13 Wildtype Non-codel 29.11 1.34 CGGA_1154 Recurrent rAA WHO III Female 369 1 33 Mutant Non-codel 70.19 9.26 CGGA_1155 Primary AA WHO III Male 1373 1 43 Mutant Codel 56.5 1.85 CGGA_1156 Primary A WHO II Female 3194 0 41 Mutant Non-codel 124.21 7.63 CGGA_1157 Primary A WHO II Male 727 1 64 Wildtype Non-codel 47.3 3.3 CGGA_1158 Primary O WHO II Male 3188 0 39 Mutant Codel 26.31 1.69 CGGA_1159 Primary A WHO II Male 3181 0 51 Mutant Non-codel 25.84 0.78 CGGA_1161 Primary AA WHO III Male 3180 0 36 Mutant Non-codel 28.85 1.62 CGGA_1162 Primary AOA WHO III Male 3174 0 39 NA Codel 35.14 1.99 CGGA_1164 Recurrent rGBM WHO IV Female 1022 1 38 Mutant Codel 17.95 4.75 CGGA_1169 Primary AA WHO III Male 1765 1 30 Mutant Non-codel 27.14 1.32 CGGA_1172 Primary GBM WHO IV Female 3131 0 36 Mutant Non-codel 210.06 9.53 CGGA_1178 Recurrent rAA WHO III Male 422 1 41 Mutant Non-codel 2.13 0.34 CGGA_1181 Primary A WHO II Male 318 0 36 Mutant Non-codel 161.51 0.96 CGGA_1183 Primary AA WHO III Female 408 1 25 Wildtype Non-codel 140.16 7.9 CGGA_1184 Recurrent rAA WHO III Male 156 1 46 Mutant Non-codel 5.6 0.93 CGGA_1185 Recurrent rAA WHO III Female 731 1 50 Wildtype Non-codel 159 0.64 CGGA_1191 Primary AO WHO III Male 3082 0 53 Mutant Codel 49.89 3.26 CGGA_1192 Primary A WHO II Female 3080 0 43 Mutant Non-codel 171.06 10.33 CGGA_1195 Primary AA WHO III Male 476 1 43 Mutant Non-codel 14.56 0.41 CGGA_1198 Primary O WHO II Male 3066 0 30 Mutant NA 1.53 0.45 CGGA_120 Recurrent rGBM WHO IV Male 288 1 42 Wildtype Non-codel 153.47 9.22 CGGA_1204 Primary O WHO II Male 3056 0 53 Mutant Codel 13.07 1.25 CGGA_1205 Primary AA WHO III Female 929 1 59 Wildtype NA 15.97 5.08 CGGA_1207 Primary AOA WHO III Female 3049 0 49 NA Codel 30.69 1.32 CGGA_1208 Recurrent rGBM WHO IV Male 161 1 38 Wildtype Non-codel 307.56 35.73 CGGA_1211 Primary O WHO II Male 3042 0 40 Mutant Codel 21.63 3.06 CGGA_1212 Primary AA WHO III Male 2292 1 31 Mutant Non-codel 64.51 10.67 CGGA_1223 Primary AA WHO III Male 682 1 42 Wildtype Non-codel 3.32 0.51 CGGA_1226 Primary A WHO II Female 670 1 33 Wildtype Non-codel 22.01 2.11 CGGA_1228 Primary A WHO II Male 2626 0 34 Wildtype Non-codel 39.02 2.62 CGGA_1232 Primary AA WHO III Male 2067 1 39 Mutant Non-codel 92.96 15.57 CGGA_1235 Primary AO WHO III Female 3004 0 32 Mutant Non-codel 18.64 2.24 CGGA_1236 Primary GBM WHO IV Female 191 1 47 Wildtype Non-codel 14.85 1.17 CGGA_1238 Primary A WHO II Female 2996 0 11 Wildtype Non-codel 85.53 8.89 CGGA_1239 Primary O WHO II Female 2997 0 44 Mutant Codel 36.47 3.42 CGGA_1248 Recurrent rGBM WHO IV Male 138 1 54 Wildtype Non-codel 2.3 1.71 CGGA_1255 Recurrent rGBM WHO IV Male 118 1 49 Wildtype Non-codel 241.56 9.43 CGGA_1256 Primary GBM WHO IV Female 2557 0 52 NA Non-codel 40.31 1.43 CGGA_1257 Recurrent rGBM WHO IV Male 192 1 59 Wildtype Non-codel 3.9 1.12 CGGA_1260 Recurrent rGBM WHO IV Male 177 1 32 Wildtype Non-codel 17.96 2.46 CGGA_1262 Recurrent rGBM WHO IV Female 166 1 69 Wildtype NA 2.17 2.38 CGGA_1264 Primary AO WHO III Female 2929 0 37 Mutant Codel 31.73 1.62 CGGA_1269 Primary AO WHO III Female 2923 0 35 Mutant Codel 26.3 4.48 CGGA_1273 Recurrent rAA WHO III Male 2438 0 64 Mutant Non-codel 33.56 6.96 CGGA_1282 Primary GBM WHO IV Female 1116 1 33 Wildtype Non-codel 115.41 6.15 CGGA_1286 Primary O WHO II Female 2906 0 52 Mutant Codel 19.3 0.95 CGGA_1291 Primary AO WHO III Male 2422 0 41 NA Codel 8.81 2.2 CGGA_1295 Recurrent rAA WHO III Male 310 1 40 Mutant Non-codel 75.52 6.63 CGGA_1300 Primary AA WHO III Male 1793 1 35 Mutant Non-codel 37.05 4.09 CGGA_1303 Primary AOA WHO III Female 2861 0 45 Mutant NA 1.79 1.17 CGGA_1305 Primary AA WHO III Male 2702 1 43 Mutant Non-codel 86.36 2.26 CGGA_1309 Primary AO WHO III Male 964 0 65 NA Codel 26.71 2.53 CGGA_1311 Recurrent rAO WHO III Female 1080 1 29 Mutant Codel 67.58 6.27 CGGA_1317 Primary OA WHO II Male 2864 0 45 Mutant NA 3.78 0.45 CGGA_1318 Primary A WHO II Male 1497 0 39 Mutant Non-codel 68.34 8.83 CGGA_1319 Primary AO WHO III Female 2861 0 42 Wildtype Non-codel 17.17 2.47 CGGA_1321 Primary AA WHO III Male 702 1 46 Mutant Non-codel 147.43 3.86 CGGA_1325 Recurrent rGBM WHO IV Male NA NA 20 Wildtype NA 36.94 2.75 CGGA_1326 Primary GBM WHO IV Male 322 1 45 Mutant Non-codel 388.34 3.42 CGGA_1334 Primary A WHO II Female 146 1 33 Wildtype Non-codel 95.49 17.24 CGGA_1335 Primary O WHO II Female 2839 0 43 Mutant Codel 53.79 0.51 CGGA_1337 Recurrent rGBM WHO IV Male 2172 1 67 NA Non-codel 12.13 0.84 CGGA_1339 Primary O WHO II Male 2832 0 41 Mutant Codel 24.35 1.58 CGGA_1345 Primary O WHO II Male 2825 0 56 Mutant Codel 92.87 6.51 CGGA_135 Primary AA WHO III Female 1924 1 41 Wildtype Non-codel 19.29 8.15 CGGA_1350 Primary O WHO II Male 2819 0 36 Mutant NA 1.44 0.95 CGGA_1353 Primary GBM WHO IV Male 1022 1 65 Wildtype Non-codel 1.68 1.03 CGGA_1354 Primary GBM WHO IV Female 530 1 40 Wildtype Non-codel 1.77 0.26 CGGA_1356 Recurrent rAA WHO III Male 948 1 52 Mutant Non-codel 8.03 0.87 CGGA_1359 Recurrent rAA WHO III Male 343 1 21 Wildtype Non-codel 593.81 1.65 CGGA_1361 Primary O WHO II Male 2804 0 40 Mutant Non-codel 28.03 7.86 CGGA_1362 Primary AA WHO III Female 2804 0 64 Wildtype Non-codel 30.32 5.13 CGGA_1365 Primary GBM WHO IV Male 253 1 55 Wildtype NA 1.27 0.43 CGGA_1368 Primary O WHO II Male 2797 0 49 Mutant NA 8.44 1.11 CGGA_1369 Primary AO WHO III Female 360 0 37 Mutant Non-codel 41.01 1.59 CGGA_1371 Primary GBM WHO IV Male 2791 0 68 Wildtype Non-codel 189.38 4.64 CGGA_1377 Primary AA WHO III Male 2780 0 28 Mutant Non-codel 23.71 5.56 CGGA_1378 Primary GBM WHO IV Male 378 1 47 Wildtype NA 6.73 0.73 CGGA_1380 Primary GBM WHO IV Male 291 1 46 Wildtype Non-codel 92.1 9.26 CGGA_1382 Primary GBM WHO IV Male 284 1 57 Wildtype Non-codel 3.2 0.69 CGGA_1383 Recurrent rAA WHO III Female 884 0 47 Mutant Codel 8.38 0.22 CGGA_1386 Primary AO WHO III Male 2770 0 34 NA Codel 21.97 1.15 CGGA_1387 Recurrent rGBM WHO IV Male 90 1 41 Wildtype Non-codel 0.67 1.01 CGGA_1389 Primary AO WHO III Female 1669 1 67 Mutant Codel 67.64 0.93 CGGA_139 Primary GBM WHO IV Male 694 1 59 Mutant Non-codel 1.14 0.65 CGGA_1390 Recurrent rAA WHO III Male 2050 0 50 Mutant Non-codel 20.24 5.98 CGGA_1391 Primary GBM WHO IV Male 426 0 62 Wildtype Non-codel 4.35 0.3 CGGA_1392 Primary GBM WHO IV Male 473 1 62 Wildtype Non-codel 2.5 0.16 CGGA_1398 Recurrent rAA WHO III Male 554 1 43 Mutant Non-codel 44.84 6.44 CGGA_1400 Recurrent rAO WHO III Female 2742 0 53 NA Codel 30.73 1 CGGA_1401 Primary AA WHO III Male 1680 1 39 Mutant Non-codel 22.84 3.08 CGGA_1402 Primary GBM WHO IV Male 2742 0 30 Wildtype Non-codel 4.54 1.63 CGGA_1403 Primary GBM WHO IV Female 679 1 43 Wildtype Non-codel 0.81 0.28 CGGA_1404 Primary AO WHO III Female 2741 0 56 Mutant Codel 51.53 1.82 CGGA_1407 Primary AO WHO III Female 2728 0 29 Mutant Codel 17.5 0.93 CGGA_1410 Primary GBM WHO IV Female 825 1 27 Wildtype Non-codel 48.08 16.2 CGGA_1413 Primary AO WHO III Male 2720 0 35 Mutant Codel 8.64 2.91 CGGA_1415 Recurrent rGBM WHO IV Female 2719 0 30 Wildtype Non-codel 186.03 52.41 CGGA_1416 Primary AO WHO III Male 1933 1 42 Mutant Codel 2.59 0.29 CGGA_1417 Primary AO WHO III Male 2713 0 56 Mutant Codel 22.01 8.48 CGGA_1418 Primary GBM WHO IV Female 287 1 73 Wildtype NA 0.44 0.22 CGGA_1419 Recurrent rGBM WHO IV Male 249 1 56 Wildtype Non-codel 9.14 2.19 CGGA_1420 Primary GBM WHO IV Male 364 1 60 Wildtype Non-codel 12.38 0.31 CGGA_1421 Primary AO WHO III Male 2699 0 35 NA Non-codel 2.82 0.48 CGGA_1422 Primary GBM WHO IV Male 204 1 76 Wildtype NA 1.17 0.8 CGGA_1424 Primary AO WHO III Female 2692 0 41 Mutant NA 0.72 0.7 CGGA_1425 Primary GBM WHO IV Female 640 1 22 Wildtype Codel 1.78 0.26 CGGA_1426 Primary GBM WHO IV Female 133 1 50 Wildtype Non-codel 880.15 52.34 CGGA_1427 Primary OA WHO II Female 339 0 30 NA Non-codel 8.51 3.01 CGGA_1429 Recurrent rGBM WHO IV Female 2685 0 40 Mutant Codel 23.71 4.27 CGGA_1430 Recurrent rGBM WHO IV Female 162 1 28 Wildtype Non-codel 0.55 0.11 CGGA_1431 Primary AA WHO III Male 2048 1 48 Mutant Non-codel 62.01 3.24 CGGA_1433 Primary GBM WHO IV Female 394 1 72 Wildtype Non-codel 3.14 0.2 CGGA_1434 Recurrent rAA WHO III Male 67 1 61 Wildtype Non-codel 7.64 1.42 CGGA_1435 Primary AA WHO III Female 1657 1 46 Mutant Non-codel 38.12 9.05 CGGA_1437 Recurrent rAA WHO III Male 1037 1 48 Wildtype Non-codel 11.28 0.96 CGGA_1440 Primary O WHO II Female 2670 0 29 Mutant Codel 31.13 2.35 CGGA_1441 Primary GBM WHO IV Male 1882 1 70 Wildtype Non-codel 8.89 3.04 CGGA_1443 Recurrent rA WHO II Male 2665 0 41 Wildtype Non-codel 17.42 2.82 CGGA_1444 Primary GBM WHO IV Female 378 1 68 Wildtype Non-codel 2.44 1 CGGA_1445 Recurrent rAA WHO III Male 2664 0 37 Wildtype NA 3.38 0.34 CGGA_1446 Primary OA WHO II Male 2664 0 29 Mutant NA 2.38 0.21 CGGA_1447 Recurrent rAA WHO III Male 308 1 48 Wildtype NA 1.33 0.69 CGGA_1451 Primary GBM WHO IV Female 438 1 45 Wildtype Non-codel 3.1 0.37 CGGA_1452 Primary GBM WHO IV Male 468 1 53 Wildtype Non-codel 4.68 0.74 CGGA_1454 Primary A WHO II Female 2655 0 42 Wildtype Non-codel 3.25 0.4 CGGA_1455 Primary O WHO II Male 2655 0 40 Mutant NA 2.02 0.74 CGGA_1457 Primary GBM WHO IV Male 312 1 60 Wildtype Non-codel 339.87 16.97 CGGA_1458 Recurrent rAO WHO III Female 127 1 54 Mutant Codel 76.32 0.93 CGGA_1459 Recurrent rAA WHO III Male 503 1 55 Wildtype Non-codel 1.96 0.78 CGGA_1461 Primary GBM WHO IV Female 226 1 60 Wildtype Non-codel 2.64 0.59 CGGA_1462 Primary GBM WHO IV Male 174 1 49 Wildtype Non-codel 8.02 39.06 CGGA_1463 Primary O WHO II Female 2633 0 69 Mutant Codel 34.98 15.81 CGGA_1467 Primary GBM WHO IV Male 866 1 58 Mutant NA 13.54 1.4 CGGA_1469 Primary AOA WHO III Male 2626 0 46 Mutant NA 4.27 0.4 CGGA_1471 Primary A WHO II Male 2623 0 45 Mutant Non-codel 127.55 8.49 CGGA_1472 Primary GBM WHO IV Male 1025 1 34 NA Non-codel 41.71 20.16 CGGA_1473 Recurrent rAA WHO III Female 265 1 28 NA Non-codel 118.69 36.66 CGGA_1474 Primary AO WHO III Female 333 0 50 Mutant NA 1.82 2.34 CGGA_1476 Primary GBM WHO IV Female 299 1 53 Wildtype Non-codel 5.49 0.68 CGGA_1477 Primary OA WHO II Male 1194 1 43 NA Non-codel 23.15 1.56 CGGA_1478 Primary GBM WHO IV Female 542 1 72 Wildtype Non-codel 3.59 0.38 CGGA_1480 Recurrent rGBM WHO IV Male 405 1 41 Wildtype Non-codel 17.13 4.55 CGGA_1481 Primary GBM WHO IV Male 131 1 55 Wildtype NA 0.83 0.17 CGGA_1482 Primary AO WHO III Male 2592 0 38 NA Codel 15.96 0.48 CGGA_1486 Primary GBM WHO IV Male 184 1 45 Wildtype NA 0.15 0.08 CGGA_1487 Recurrent rAA WHO III Female 520 1 49 Wildtype Non-codel 2.21 0.34 CGGA_1488 Primary A WHO II Male 2586 0 31 Mutant Non-codel 23.91 14.23 CGGA_1491 Primary GBM WHO IV Male 246 1 29 Mutant Non-codel 1.62 0.54 CGGA_1492 Recurrent rGBM WHO IV Female 268 1 47 Wildtype Non-codel 1.86 2.27 CGGA_1494 Primary GBM WHO IV Male 269 1 21 Wildtype NA 3.44 4.7 CGGA_1496 Recurrent rGBM WHO IV Female 330 1 42 Mutant Codel 9.4 13.48 CGGA_1497 Primary AA WHO III Female 1178 1 24 Mutant Non-codel 295.88 14.35 CGGA_1498 Primary GBM WHO IV Male NA NA 69 Wildtype NA 1.26 8.01 CGGA_1500 Primary GBM WHO IV Female 108 1 45 Wildtype Non-codel 9.12 1.96 CGGA_1501 Primary GBM WHO IV Male 222 1 58 NA Non-codel 3.23 0.26 CGGA_1502 Primary O WHO II Female 2565 0 27 Mutant Codel 11.92 0.92 CGGA_1503 Primary GBM WHO IV Male 777 1 47 Wildtype NA 0.7 0.22 CGGA_1504 Primary AA WHO III Female 2558 0 44 Mutant Non-codel 124.22 3.14 CGGA_1505 Recurrent rGBM WHO IV Male 172 1 30 Mutant Non-codel 159.06 26.01 CGGA_1507 Recurrent rGBM WHO IV Female 715 1 41 Wildtype Non-codel 241.1 13.69 CGGA_1508 Primary AA WHO III Male 1049 1 39 Mutant Non-codel 14.29 2.08 CGGA_1510 Recurrent rAA WHO III Male 271 1 40 Mutant Non-codel 24.74 10.07 CGGA_1513 Recurrent rAO WHO III Female 2352 1 36 Mutant Codel 4.1 0.46 CGGA_1514 Primary A WHO II Female 76 1 57 Wildtype NA 0.78 1.27 CGGA_1516 Primary O WHO II Male 2530 0 46 Mutant Codel 34.5 3.12 CGGA_1517 Primary O WHO II Male 2530 0 42 Mutant Codel 126 1.92 CGGA_1518 Primary AA WHO III Female 411 1 19 Wildtype Non-codel 113.17 4.77 CGGA_1520 Recurrent rGBM WHO IV Female 297 1 67 Wildtype Non-codel 9.99 0.92 CGGA_1521 Primary GBM WHO IV Female 205 1 63 Wildtype Non-codel 2.06 0.81 CGGA_1523 Primary A WHO II Male 2508 0 50 Mutant Non-codel 41.72 18.64 CGGA_1524 Recurrent rAO WHO III Male 1004 1 36 Mutant Codel 17.72 1.34 CGGA_1525 Primary AOA WHO III Male 1686 1 41 NA Non-codel 13.23 1.95 CGGA_1526 Primary AO WHO III Male 2502 0 39 Mutant Codel 5.81 3.6 CGGA_1527 Primary AA WHO III Male 1714 1 47 Mutant Non-codel 59.1 4.33 CGGA_1528 Primary O WHO II Female 2497 0 27 Mutant Codel 12.65 1.42 CGGA_1529 Primary GBM WHO IV Male 583 1 63 Wildtype Non-codel 161.63 0.19 CGGA_1530 Primary AOA WHO III Male 2497 0 41 NA Non-codel 16.14 4.37 CGGA_1531 Primary AA WHO III Male NA NA 36 Mutant Non-codel 35.52 19.15 CGGA_1533 Recurrent rAA WHO III Female 1217 1 61 Wildtype Non-codel 69.07 3.6 CGGA_1534 Primary GBM WHO IV Female 27 1 58 Mutant Non-codel 68.86 1.02 CGGA_1535 Recurrent rGBM WHO IV Male 232 1 43 Mutant Non-codel 75.82 5.52 CGGA_1536 Primary A WHO II Male 840 1 53 Mutant Non-codel 23.32 12.08 CGGA_1537 Primary GBM WHO IV Male 97 1 73 Wildtype Non-codel 5.14 0.83 CGGA_1538 Recurrent rGBM WHO IV Female 247 1 57 Wildtype Non-codel 3.23 0.6 CGGA_1539 Primary GBM WHO IV Male 2462 0 61 Mutant Non-codel 55.17 5.87 CGGA_1541 Recurrent rGBM WHO IV Female 67 1 50 Wildtype Non-codel 4.35 0.37 CGGA_1542 Primary GBM WHO IV Male 184 0 26 Mutant NA 0.82 0.45 CGGA_1543 Primary GBM WHO IV Male 723 1 57 Mutant Non-codel 191.58 2.3 CGGA_1544 Primary AA WHO III Female 208 1 38 Mutant Non-codel 16.41 0.8 CGGA_1546 Primary GBM WHO IV Male 223 1 56 Wildtype Non-codel 4.47 0.8 CGGA_1548 Primary GBM WHO IV Male 1054 1 53 Wildtype Non-codel 5.01 7.66 CGGA_1551 Primary GBM WHO IV Female 347 1 50 NA Non-codel 3.23 0.44 CGGA_1552 Primary AO WHO III Male 2432 0 39 Mutant Codel 4.76 0.71 CGGA_1553 Recurrent rAA WHO III Male 540 1 30 Mutant Non-codel 3.55 1.42 CGGA_1554 Recurrent rAO WHO III Male 824 1 34 Mutant Codel 7.82 4.74 CGGA_1557 Primary AO WHO III Male 2427 0 47 Mutant Codel 85.34 1.81 CGGA_1558 Recurrent rGBM WHO IV Male 130 1 71 Wildtype Non-codel 3.9 0.93 CGGA_1559 Primary GBM WHO IV Male 603 1 63 Mutant Codel 95.58 2.64 CGGA_1560 Primary GBM WHO IV Female 459 1 35 Mutant Non-codel 580.65 5.66 CGGA_1562 Primary AO WHO III Male 2032 1 51 Mutant Codel 18.49 1.83 CGGA_1563 Primary A WHO II Female 2423 0 32 Wildtype Non-codel 23.76 1.81 CGGA_1564 Primary GBM WHO IV Male 190 1 48 Wildtype Non-codel 342.37 10.2 CGGA_1565 Primary AA WHO III Female 1417 0 23 Mutant Non-codel 115.29 3.94 CGGA_1566 Primary AO WHO III Female 2420 0 43 Mutant Codel 16.06 1.1 CGGA_1567 Primary AO WHO III Female 840 1 48 Mutant Non-codel 208.69 3.34 CGGA_1568 Primary AA WHO III Female 345 0 26 NA Non-codel 39.05 2.44 CGGA_1569 Primary AA WHO III Female 1406 0 27 Wildtype Codel 10.67 0.86 CGGA_157 Recurrent rA WHO II Male 914 1 34 NA Non-codel 52.37 1.88 CGGA_1571 Primary GBM WHO IV Female 412 0 43 Mutant Non-codel 23.17 0.67 CGGA_1572 Recurrent rGBM WHO IV Female 160 1 60 Wildtype Non-codel 59.36 0.88 CGGA_1575 Recurrent rAA WHO III Male 129 1 37 Mutant Non-codel 37.4 3.97 CGGA_1579 Primary A WHO II Male 2398 0 37 Wildtype Non-codel 13.03 1.68 CGGA_1580 Primary AA WHO III Female 1581 1 34 Mutant Non-codel 91.29 14.05 CGGA_1583 Primary OA WHO II Female 1606 1 51 NA Non-codel 7.25 0.97 CGGA_1586 Primary GBM WHO IV Female 232 1 55 Wildtype Non-codel 6.99 3.15 CGGA_1587 Primary AA WHO III Female 750 1 30 Mutant Non-codel 56.69 8.45 CGGA_1588 Primary AA WHO III Female 2003 0 24 Wildtype Non-codel 20.07 5.02 CGGA_1589 Recurrent rA WHO II Male 342 1 49 Wildtype Non-codel 2.01 0.94 CGGA_1591 Recurrent rAA WHO III Male 1133 1 54 Mutant Non-codel 20.29 3.43 CGGA_1592 Recurrent rAO WHO III Male 1588 1 37 Mutant Codel 48.28 13.29 CGGA_1594 Recurrent rA WHO II Male 480 0 25 NA Non-codel 18.34 2.2 CGGA_1595 Primary GBM WHO IV Female 2363 0 34 NA Non-codel 37.85 1.1 CGGA_1596 Primary GBM WHO IV Male 205 1 63 Wildtype Non-codel 6.04 0.28 CGGA_1597 Primary GBM WHO IV Male 174 1 58 Wildtype Non-codel 311.03 8.79 CGGA_1598 Primary AA WHO III Male 564 1 31 Wildtype Non-codel 195.46 2.02 CGGA_1601 Primary GBM WHO IV Male 710 1 66 Wildtype Non-codel 9.83 1.09 CGGA_1603 Recurrent rGBM WHO IV Male 356 1 18 Wildtype Non-codel 332.45 2.04 CGGA_1604 Recurrent rGBM WHO IV Male 740 1 46 Mutant Non-codel 599.84 14.66 CGGA_1605 Recurrent rGBM WHO IV Male 321 1 34 Wildtype Non-codel 4.93 0.76 CGGA_1606 Primary AA WHO III Female 471 1 28 Wildtype Non-codel 0.56 0.36 CGGA_1607 Recurrent rO WHO II Female 1333 1 35 Mutant Codel 24.69 3.73 CGGA_1608 Recurrent rAA WHO III Male 1953 0 38 Mutant Non-codel 12.44 1.06 CGGA_1610 Recurrent rAOA WHO III Male 1058 1 39 NA Codel 11.52 0.44 CGGA_1611 Recurrent rGBM WHO IV Female 1158 1 30 Mutant Non-codel 1.78 0.28 CGGA_1612 Primary GBM WHO IV Male 718 1 68 Wildtype Non-codel 2.84 0.8 CGGA_1613 Primary GBM WHO IV Male 250 0 53 Wildtype Non-codel 405.25 7.77 CGGA_1614 Recurrent rAA WHO III Male 1079 1 51 Mutant Non-codel 68.01 2.53 CGGA_1615 Recurrent rGBM WHO IV Male 586 1 48 Wildtype Codel 0.7 0.38 CGGA_1617 Primary O WHO II Female 2310 0 35 NA Codel 52.04 0.27 CGGA_1618 Primary AA WHO III Male 2319 0 31 Mutant Non-codel 70.68 6.4 CGGA_1619 Primary AA WHO III Male 766 1 44 Mutant Non-codel 282.6 6.89 CGGA_1620 Primary AO WHO III Male 2312 0 51 Mutant Codel 30.41 1.25 CGGA_1621 Primary A WHO II Female 2311 0 48 Mutant Non-codel 74.29 2.42 CGGA_1623 Primary AA WHO III Female 2307 0 16 Wildtype Non-codel 2.99 0.7 CGGA_1624 Recurrent rGBM WHO IV Female 87 1 27 Mutant Non-codel 1.17 0.25 CGGA_1626 Primary GBM WHO IV Male 696 1 66 Wildtype Non-codel 299.53 11.76 CGGA_1627 Primary AA WHO III Male 2301 0 37 Mutant Non-codel 51.05 3.36 CGGA_1630 Primary O WHO II Male 2160 0 26 NA Codel 7.45 0.13 CGGA_1631 Recurrent rGBM WHO IV Female 221 1 58 Wildtype Non-codel 13.54 0.37 CGGA_1634 Primary GBM WHO IV Female 366 1 26 Wildtype Non-codel 492.88 17.26 CGGA_1635 Primary GBM WHO IV Female 332 1 43 Wildtype NA 1.72 0.09 CGGA_1640 Primary AOA WHO III Male 2267 0 55 NA Non-codel 63.13 0.74 CGGA_1641 Recurrent rGBM WHO IV Female 291 1 57 Wildtype Non-codel 196.22 1.96 CGGA_1642 Primary A WHO II Male 2266 0 48 Mutant Non-codel 35.14 1.07 CGGA_1643 Primary GBM WHO IV Female NA NA 50 Wildtype Non-codel 466.36 10.7 CGGA_1644 Primary GBM WHO IV Male 173 1 48 Wildtype Non-codel 718.99 9.57 CGGA_1645 Primary AA WHO III Male 1996 0 59 Mutant Non-codel 58 10.43 CGGA_1647 Primary O WHO II Male 2229 0 40 NA Codel 7.56 0.05 CGGA_1648 Primary AOA WHO III Female 1747 0 45 NA Codel 7.5 1 CGGA_1649 Primary O WHO II Male 2225 0 36 Mutant Codel 21.4 0.41 CGGA_165 Primary A WHO II Male 183 0 34 NA Non-codel 21.52 0.86 CGGA_1650 Primary GBM WHO IV Male 1283 1 36 Mutant Non-codel 18.24 3.4 CGGA_1651 Recurrent rA WHO II Female 842 1 44 Mutant Non-codel 4.58 0.55 CGGA_1653 Primary OA WHO II Female 2217 0 47 NA Non-codel 3.19 0.26 CGGA_1654 Primary GBM WHO IV Male NA NA 61 Wildtype Non-codel 402.06 3.13 CGGA_1655 Primary A WHO II Male 1209 0 48 Mutant Non-codel 29.48 1.27 CGGA_1656 Recurrent rGBM WHO IV Male 149 1 56 Wildtype Non-codel 1.33 0.27 CGGA_1657 Primary AOA WHO III Female 2215 0 20 NA Non-codel 21.99 1.06 CGGA_1658 Recurrent rGBM WHO IV Female 1574 1 64 Wildtype Non-codel 13.96 4.46 CGGA_1659 Recurrent rGBM WHO IV Male 387 1 24 Wildtype Non-codel 4.21 1.43 CGGA_1660 Primary A WHO II Male NA NA 41 Wildtype Codel 4.91 17 CGGA_1661 Primary AA WHO III Female 2209 0 42 NA Non-codel 37.98 1.51 CGGA_1662 Primary O WHO II Female 1493 0 55 Mutant Codel 12.24 2.28 CGGA_1663 Recurrent rGBM WHO IV Male 290 1 61 Wildtype Non-codel 27.46 3.53 CGGA_1664 Primary O WHO II Female 1528 1 40 Mutant Non-codel 6.71 0.2 CGGA_1666 Primary GBM WHO IV Male 249 1 60 Wildtype NA 42.87 7.51 CGGA_1667 Primary AO WHO III Female 2180 0 40 Mutant Codel 10.21 2.46 CGGA_1669 Primary AA WHO III Female 139 1 44 Wildtype Non-codel 346.97 30.65 CGGA_1670 Recurrent rAA WHO III Female 365 1 30 Wildtype Non-codel 222.78 7.98 CGGA_1671 Primary AA WHO III Female 2168 0 26 Mutant Non-codel 60.98 4.81 CGGA_1672 Primary AOA WHO III Female NA NA 49 NA Non-codel 15.57 0.31 CGGA_1673 Primary A WHO II Female 2160 0 23 Mutant Non-codel 23.11 2.23 CGGA_1675 Primary AA WHO III Male 2154 0 38 Mutant Non-codel 78.06 2.88 CGGA_1677 Primary A WHO II Female NA NA 39 NA Non-codel 34.78 1.8 CGGA_1678 Primary GBM WHO IV Male 657 1 51 Wildtype NA 0.63 0.19 CGGA_1679 Primary AO WHO III Female 2146 0 52 Mutant Codel 4.24 0.44 CGGA_1680 Primary AA WHO III Male 596 1 45 Mutant Non-codel 35.53 1.59 CGGA_1681 Primary GBM WHO IV Female 346 1 58 Wildtype Codel 19.53 2.76 CGGA_1682 Recurrent rGBM WHO IV Male 345 1 67 Wildtype Non-codel 1.96 2.35 CGGA_1684 Primary GBM WHO IV Male NA NA 51 Wildtype Non-codel 11.52 0.91 CGGA_1685 Recurrent rAA WHO III Male 225 1 33 Mutant Non-codel 1.95 1.14 CGGA_1686 Primary AA WHO III Male 745 1 27 Wildtype Non-codel 10.75 0.27 CGGA_1687 Primary GBM WHO IV Male 2118 0 14 Wildtype Non-codel 808.66 36.86 CGGA_1688 Recurrent rAA WHO III Female 51 1 51 Wildtype Non-codel 111.33 1.98 CGGA_1689 Primary A WHO II Male 2118 0 45 Mutant Non-codel 60.42 8.98 CGGA_1690 Primary GBM WHO IV Male 592 1 60 Wildtype Non-codel 5.24 2.08 CGGA_1693 Primary AO WHO III Male 517 1 61 NA Non-codel 33.7 0.91 CGGA_1694 Primary GBM WHO IV Male 624 1 55 Wildtype Non-codel 6.63 2.26 CGGA_1695 Recurrent rAA WHO III Male 2094 0 45 Mutant Non-codel 46.01 1.25 CGGA_1696 Primary AA WHO III Male 1205 0 72 Wildtype NA 4.04 3.83 CGGA_1697 Recurrent rGBM WHO IV Female 89 1 47 Wildtype Non-codel 3.63 0.41 CGGA_1698 Primary GBM WHO IV Female 388 1 55 Wildtype Non-codel 10.21 1.26 CGGA_1699 Primary GBM WHO IV Female 2088 0 41 Mutant NA 0.96 0.68 CGGA_1700 Primary AO WHO III Male 2076 0 49 Mutant Codel 36.38 1.3 CGGA_1701 Primary AO WHO III Male 1696 0 44 Mutant Codel 62.87 2.32 CGGA_1702 Recurrent rGBM WHO IV Female 168 1 29 Wildtype Non-codel 36.46 10.52 CGGA_1703 Primary A WHO II Female 1592 0 30 Mutant Non-codel 159.86 3.38 CGGA_1704 Primary A WHO II Female 2064 0 32 Wildtype Non-codel 80.2 3.89 CGGA_1706 Primary GBM WHO IV Male 2068 0 60 Wildtype Non-codel 600.59 12.42 CGGA_1708 Primary GBM WHO IV Female 1122 1 54 Wildtype Non-codel 1017.58 17.15 CGGA_1709 Primary GBM WHO IV Male 415 1 47 Wildtype Non-codel 234.88 13.61 CGGA_1713 Primary GBM WHO IV Male 332 1 62 Wildtype Non-codel 2.7 1.6 CGGA_1714 Primary AOA WHO III Female 2034 0 37 NA Codel 14.18 0.82 CGGA_1715 Primary O WHO II Female 2033 0 12 Wildtype Non-codel 140.65 12.37 CGGA_1716 Recurrent rAA WHO III Male 951 1 38 Mutant Non-codel 121.4 16.7 CGGA_1718 Primary AA WHO III Female 1996 0 37 Mutant Non-codel 44.15 2.39 CGGA_1720 Primary A WHO II Male 1994 0 35 Mutant Non-codel 17.2 9.94 CGGA_1721 Primary AO WHO III Female 1994 0 46 NA Codel 38.53 0.79 CGGA_1722 Primary GBM WHO IV Female 349 1 60 Wildtype NA 0.21 0.03 CGGA_1723 Primary AO WHO III Female 1986 0 39 Mutant Codel 68.49 0.48 CGGA_1725 Primary AO WHO III Female 1983 0 33 Mutant Codel 53.09 3.66 CGGA_1727 Primary GBM WHO IV Male 1980 0 48 Mutant Non-codel 68.71 2.96 CGGA_1728 Primary GBM WHO IV Male 917 1 45 Mutant Non-codel 20.4 3.19 CGGA_1729 Recurrent rGBM WHO IV Male 244 1 52 Wildtype Non-codel 10.11 0.96 CGGA_1731 Primary AA WHO III Female 1976 0 45 Mutant Non-codel 59.32 1.58 CGGA_1735 Primary GBM WHO IV Male 813 1 54 Wildtype Non-codel 36.3 16.21 CGGA_1736 Primary GBM WHO IV Female 938 1 57 Wildtype Non-codel 2.91 0.72 CGGA_1737 Primary AO WHO III Male 1952 0 33 Mutant Codel 34.49 2.43 CGGA_1738 Primary AA WHO III Male 469 1 49 Wildtype Non-codel 5.59 0.32 CGGA_1739 Recurrent rAA WHO III Male 515 1 45 Mutant Non-codel 68.95 2.8 CGGA_1740 Primary GBM WHO IV Female 363 1 50 Wildtype Non-codel 2.38 1.02 CGGA_1743 Primary AA WHO III Female 1361 1 47 Mutant Non-codel 20.94 2.05 CGGA_1744 Primary GBM WHO IV Male 1936 0 51 NA Non-codel 7.12 12.46 CGGA_1745 Primary AOA WHO III Female 1929 0 45 Mutant NA 0.33 0.09 CGGA_1747 Primary AOA WHO III Female 293 1 27 NA Non-codel 51.32 3.02 CGGA_1749 Primary GBM WHO IV Female 401 1 44 Wildtype Non-codel 3.82 0.96 CGGA_1750 Primary GBM WHO IV Female 250 1 52 Wildtype Non-codel 8.13 2.54 CGGA_1758 Primary GBM WHO IV Female 414 1 45 Wildtype Non-codel 358.45 25.42 CGGA_1760 Recurrent rA WHO II Male 459 1 51 Wildtype Non-codel 18.03 3.93 CGGA_1764 Primary GBM WHO IV Male 710 1 33 Mutant Non-codel 154.32 8.69 CGGA_1767 Primary GBM WHO IV Male 86 1 63 Wildtype NA 45.74 3.02 CGGA_1769 Primary GBM WHO IV Female 1854 0 49 Wildtype Non-codel 7.42 2.33 CGGA_1770 Recurrent rGBM WHO IV Female 267 1 43 Mutant Non-codel 24.06 3.14 CGGA_1771 Recurrent rAA WHO III Male 1068 1 38 Mutant Non-codel 44.86 8.04 CGGA_1773 Recurrent rGBM WHO IV Female 104 1 46 Wildtype Non-codel 3.3 0.34 CGGA_1776 Recurrent rGBM WHO IV Male 259 1 23 Wildtype Non-codel 2.73 1.72 CGGA_1780 Primary GBM WHO IV Female 1826 0 57 Wildtype NA 21.99 3.51 CGGA_1785 Recurrent rGBM WHO IV Male 329 1 34 Mutant Non-codel 13.85 1.63 CGGA_1786 Recurrent rAO WHO III Female 1817 0 54 Mutant Codel 17.04 0.08 CGGA_1791 Primary AA WHO III Male 855 1 55 Wildtype NA 7.13 1.26 CGGA_1807 Primary GBM WHO IV Female 247 1 65 Wildtype Non-codel 3.37 0.53 CGGA_1809 Primary AO WHO III Male 343 1 27 Wildtype Non-codel 407.74 3.93 CGGA_1811 Recurrent rGBM WHO IV Male 304 1 64 Wildtype Non-codel 20.75 2.29 CGGA_1812 Primary GBM WHO IV Male 780 1 65 Wildtype Non-codel 2.52 6.38 CGGA_1814 Recurrent rGBM WHO IV Female 221 1 46 Wildtype Non-codel 695.5 48.11 CGGA_1815 Recurrent rGBM WHO IV Female 185 1 45 Wildtype Non-codel 6.38 1.33 CGGA_1817 Primary GBM WHO IV Female 399 1 72 Wildtype Non-codel 11.91 1.14 CGGA_1819 Primary GBM WHO IV Male 1005 1 55 Wildtype Non-codel 2.92 0.46 CGGA_1820 Recurrent rGBM WHO IV Female 77 1 52 Wildtype Non-codel 2.97 0.71 CGGA_1826 Primary GBM WHO IV Female 44 1 70 Wildtype Non-codel 5.12 0.53 CGGA_1829 Primary A WHO II Male 801 0 23 Wildtype Non-codel 7.88 1.24 CGGA_1833 Primary GBM WHO IV Female 494 1 60 Wildtype Non-codel 3.22 1.29 CGGA_1840 Primary GBM WHO IV Female 1179 0 58 Wildtype Non-codel 175.58 8.51 CGGA_1850 Primary A WHO II Male 750 0 29 Mutant Non-codel 98.12 12.37 CGGA_1854 Primary AA WHO III Male 1626 0 36 Mutant Non-codel 78.95 4.31 CGGA_1857 Recurrent rGBM WHO IV Male 157 1 46 Wildtype Non-codel 14.32 0.85 CGGA_1862 Primary AA WHO III Male 110 1 40 Wildtype Non-codel 1.3 0.31 CGGA_1863 Recurrent rAO WHO III Female 1594 0 50 Mutant Codel 94.53 0.44 CGGA_1865 Recurrent rGBM WHO IV Female 89 1 45 Wildtype Non-codel 236.35 36.93 CGGA_1866 Primary GBM WHO IV Male 127 1 68 Wildtype Non-codel 3.71 0.51 CGGA_1870 Primary GBM WHO IV Male 1556 0 62 Mutant Codel 11.85 1.71 CGGA_1875 Primary A WHO II Female 1558 0 22 Wildtype Non-codel 63.11 6.65 CGGA_1877 Recurrent rAO WHO III Male NA NA 35 Mutant Codel 94.73 0.57 CGGA_1880 Recurrent rAA WHO III Female 1302 0 37 Mutant Non-codel 86.11 4.85 CGGA_1882 Primary AO WHO III Male 1531 0 33 Mutant Codel 16.83 1.14 CGGA_1886 Recurrent rGBM WHO IV Male 338 1 31 Wildtype Non-codel 3.05 0.31 CGGA_1899 Recurrent rGBM WHO IV Male 176 1 45 Wildtype Non-codel 5.34 5.32 CGGA_1901 Primary GBM WHO IV Male 540 1 60 Wildtype Non-codel 8.3 0.79 CGGA_1902 Primary A WHO II Male 1479 0 33 Mutant Non-codel 43.81 2.48 CGGA_1903 Primary AOA WHO III Female 1474 0 24 NA Codel 5.67 0.91 CGGA_1906 Recurrent rAA WHO III Male 1054 1 57 Mutant Non-codel 317.26 15.49 CGGA_1908 Recurrent rGBM WHO IV Female 298 1 42 Wildtype Non-codel 2.76 0.34 CGGA_1911 Recurrent rGBM WHO IV Male 1451 0 15 Wildtype Non-codel 172.02 10.2 CGGA_1912 Recurrent rGBM WHO IV Male 507 1 48 NA Non-codel 80.93 1.9 CGGA_1916 Primary GBM WHO IV Female NA NA 33 Mutant Non-codel 7.09 5.95 CGGA_1939 Recurrent rA WHO II Male NA NA 31 NA Non-codel 21.66 1.23 CGGA_194 Recurrent rAO WHO III Female 2304 1 43 Mutant Codel 11.43 2.64 CGGA_1946 Recurrent rGBM WHO IV Female 142 1 51 Wildtype Non-codel 816.47 47.99 CGGA_1953 Recurrent rGBM WHO IV Male 73 1 47 Wildtype Non-codel 4.65 0.68 CGGA_1955 Recurrent rGBM WHO IV Male 457 1 30 NA Non-codel 12.66 0.37 CGGA_1972 Recurrent rGBM WHO IV Male 1291 0 47 Wildtype Non-codel 8.84 1.53 CGGA_1976 Recurrent rGBM WHO IV Female 73 1 53 Wildtype Non-codel 4.22 3.16 CGGA_1985 Recurrent rGBM WHO IV Male 380 1 41 Mutant Non-codel 2.28 0.37 CGGA_1994 Recurrent rAO WHO III Female 1237 0 32 Mutant Non-codel 37.99 1 CGGA_2002 Recurrent rA WHO II Male 572 1 40 Mutant Non-codel 5.61 0.51 CGGA_2003 Recurrent rGBM WHO IV Male 780 1 40 Mutant Non-codel 11.08 4.09 CGGA_2006 Recurrent rAA WHO III Male 626 1 43 Mutant Non-codel 46.63 9.02 CGGA_2008 Recurrent rGBM WHO IV Male 44 1 56 Wildtype Non-codel 18.87 2.88 CGGA_2013 Recurrent rA WHO II Male 139 1 41 Mutant Codel 123.84 5.62 CGGA_2024 Recurrent rGBM WHO IV Female 328 1 19 Wildtype Non-codel 5.48 1.6 CGGA_2038 Recurrent rGBM WHO IV Male NA 1 44 Mutant Non-codel 174.4 14.12 CGGA_2039 Recurrent rGBM WHO IV Male 702 0 28 Wildtype Non-codel 14.67 0.2 CGGA_2046 Recurrent rAA WHO III Male 251 1 46 Mutant Non-codel 35.61 20.31 CGGA_2047 Recurrent rGBM WHO IV Female 598 1 64 Wildtype Non-codel 5.79 0.57 CGGA_2053 Recurrent rGBM WHO IV Male 1031 0 55 Wildtype Codel 2.26 0.79 CGGA_2056 Recurrent rGBM WHO IV Female 1019 0 41 Mutant Non-codel 1363.92 10.06 CGGA_2062 Recurrent rGBM WHO IV Female 41 1 63 Mutant Non-codel 5.61 6.49 CGGA_2075 Recurrent rGBM WHO IV Male 266 1 63 Wildtype Non-codel 3.26 0.43 CGGA_2078 Recurrent rGBM WHO IV Female 280 1 61 Wildtype Non-codel 22.4 5.5 CGGA_2079 Recurrent rAO WHO III Male 964 0 45 Mutant Codel 34.37 1.84 CGGA_2081 Recurrent rAO WHO III Female 961 0 39 Mutant Codel 59.28 9.64 CGGA_2082 Recurrent rGBM WHO IV Male 571 0 41 Wildtype Non-codel 13.77 1.92 CGGA_2088 Recurrent rGBM WHO IV Female NA NA 30 Wildtype Non-codel 617.78 50.75 CGGA_2106 Recurrent rGBM WHO IV Female 892 0 39 Mutant Codel 20.31 1.96 CGGA_2115 Recurrent rGBM WHO IV Female 171 1 31 Wildtype Non-codel 1.54 0.85 CGGA_2121 Recurrent rA WHO II Female 346 1 41 Mutant Non-codel 50.39 29.54 CGGA_2129 Recurrent rAA WHO III Male 828 0 48 Mutant Non-codel 64.38 3.22 CGGA_265 Recurrent rA WHO II Male 3959 0 43 Mutant Non-codel 136.79 7.37 CGGA_279 Recurrent rAA WHO III Female 1314 1 49 Mutant Non-codel 10.27 3.81 CGGA_28 Primary A WHO II Male 1103 1 25 Mutant Codel 14.33 2.44 CGGA_288 Recurrent rO WHO II Male 1057 1 49 Mutant Codel 77.12 1.34 CGGA_290 Primary O WHO II Female 4725 0 37 Mutant Codel 9.55 3.17 CGGA_320 Primary O WHO II Male 3005 1 31 Mutant Codel 1.29 1.8 CGGA_336 Recurrent rAO WHO III Female 2549 1 57 Mutant Codel 57.96 4.07 CGGA_358 Recurrent rAA WHO III Female 122 1 30 Mutant Non-codel 48.88 3.84 CGGA_362 Recurrent rA WHO II Female NA NA 39 Mutant Codel 27.35 20.56 CGGA_369 Recurrent rA WHO II Male 4606 0 33 Mutant Non-codel 7.76 0.91 CGGA_406 Recurrent rAA WHO III Female 90 1 24 Mutant Non-codel 1.57 0.67 CGGA_42 Primary A WHO II Male 2832 1 38 Mutant Codel 22.62 11.39 CGGA_420 Recurrent rAO WHO III Female 3514 0 39 Mutant Codel 2.69 0.23 CGGA_457 Recurrent rAA WHO III Male 75 1 32 Mutant Non-codel 1038.08 45.58 CGGA_474 Primary AO WHO III Male 2029 0 NA Wildtype Non-codel 48.64 1.73 CGGA_482 Primary O WHO II Male 2511 1 45 Mutant Codel 19.69 1.45 CGGA_487 Recurrent rGBM WHO IV Male 156 1 46 Wildtype Non-codel 3.63 2.17 CGGA_492 Recurrent rAA WHO III Male 652 0 27 Wildtype Non-codel 128.57 4.97 CGGA_503 Primary A WHO II Male 4410 0 51 Mutant Non-codel 7.8 2.24 CGGA_507 Recurrent rAA WHO III Female 302 1 53 Mutant Non-codel 23.19 4.6 CGGA_509 Primary GBM WHO IV Male 623 1 38 Wildtype Non-codel 447.61 33.25 CGGA_521 Primary AA WHO III Male 514 1 32 Wildtype Non-codel 146.87 11.55 CGGA_530 Recurrent rGBM WHO IV Female 506 1 41 Wildtype Non-codel 9.13 1.47 CGGA_554 Recurrent rAOA WHO III Female 134 1 46 NA Non-codel 4.1 0.15 CGGA_568 Recurrent rGBM WHO IV Male 285 1 14 Wildtype Non-codel 70.53 1.7 CGGA_583 Primary A WHO II Female 3107 1 36 Mutant NA 1.61 0.56 CGGA_619 Recurrent rA WHO II Male 550 1 40 Wildtype Non-codel 107.36 15.17 CGGA_621 Recurrent rAA WHO III Male NA NA 40 Mutant Non-codel 3.64 0.51 CGGA_625 Recurrent rAO WHO III Female 2465 1 33 Mutant Codel 11.46 1.03 CGGA_634 Primary AA WHO III Female 2633 1 35 Mutant Non-codel 8.04 5.37 CGGA_652 Recurrent rAA WHO III Male 476 1 42 Mutant Non-codel 34.77 3.27 CGGA_663 Primary A WHO II Female 4210 0 29 Mutant Non-codel 7.48 1.51 CGGA_703 Recurrent rAO WHO III Female 1355 1 31 Mutant Non-codel 87.49 11.73 CGGA_705 Primary AA WHO III Male 1507 1 41 Mutant Non-codel 39.79 25.45 CGGA_707 Primary O WHO II Female 3299 1 39 Mutant Codel 12.71 7.33 CGGA_720 Recurrent rA WHO II Female 1258 1 46 Mutant Non-codel 28.62 5.29 CGGA_721 Primary A WHO II Male 2552 1 45 Mutant Non-codel 24.82 5.33 CGGA_724 Recurrent rA WHO II Male 4147 0 32 Mutant Non-codel 21.85 0.93 CGGA_730 Recurrent rO WHO II Female 2118 1 51 Mutant Codel 24.55 2.65 CGGA_763 Recurrent rAA WHO III Male 319 0 52 Wildtype Non-codel 4.41 2.63 CGGA_777 Recurrent rGBM WHO IV Male 146 1 46 Wildtype Non-codel 4.69 4.94 CGGA_780 Recurrent rAO WHO III Female 923 1 64 Wildtype Non-codel 29.78 1.66 CGGA_799 Recurrent rAO WHO III Male 1868 1 53 Mutant Codel 67.53 2.69 CGGA_809 Primary A WHO II Male 1252 1 26 Mutant Non-codel 46.09 12.62 CGGA_810 Recurrent rAO WHO III Male 551 1 20 Wildtype Non-codel 1.84 1.91 CGGA_825 Recurrent rAA WHO III Male 836 1 36 Mutant Non-codel 164.36 4.1 CGGA_831 Primary GBM WHO IV Female 546 1 55 Wildtype Non-codel 298.79 33.23 CGGA_846 Recurrent rA WHO II Female 2991 0 39 Wildtype Non-codel 18.19 0.83 CGGA_852 Primary AA WHO III Male 169 1 40 Wildtype Non-codel 151.89 17.28 CGGA_861 Primary AA WHO III Male 893 1 29 Wildtype Non-codel 4.78 3.49 CGGA_862 Recurrent rA WHO II Male NA NA 30 Mutant Non-codel 3.46 0.58 CGGA_863 Primary A WHO II Female 2073 1 42 Wildtype Non-codel 2.42 1.2 CGGA_867 Recurrent rAA WHO III Female 367 1 40 Mutant Non-codel 10.36 1.51 CGGA_869 Recurrent rGBM WHO IV Female 537 0 36 Wildtype Non-codel 424.59 4.32 CGGA_881 Recurrent rAA WHO III Female 252 1 23 Wildtype Non-codel 146.62 3.42 CGGA_882 Recurrent rAA WHO III Male 1008 0 30 Mutant Non-codel 6 1.07 CGGA_883 Recurrent rA WHO II Female NA NA 39 Mutant Non-codel 47.43 5.23 CGGA_887 Recurrent rAO WHO III Male NA NA 25 Wildtype Non-codel 6.01 1.3 CGGA_888 Recurrent rAO WHO III Male 669 1 29 Mutant Codel 43.57 4.35 CGGA_889 Primary A WHO II Male 3943 0 23 Mutant Non-codel 5.39 1.4 CGGA_890 Primary AA WHO III Male 2982 1 39 Mutant Non-codel 18.93 26.97 CGGA_901 Primary AA WHO III Male 929 1 40 Mutant Non-codel 67.98 15.4 CGGA_903 Primary AA WHO III Female 1455 1 27 Mutant Non-codel 7.03 1.82 CGGA_D19 Recurrent rO WHO II Female 297 1 64 Mutant Codel 3.01 0.96 CGGA_D28 Primary AA WHO III Male 860 1 25 Mutant Non-codel 23.36 6.84 CGGA_D49 Recurrent NA NA Female NA NA 32 Mutant Codel 13.34 39.99 CGGA_D50 Recurrent rO WHO II Male 782 1 30 Mutant Codel 10.02 2.06 CGGA_D53 Recurrent rGBM WHO IV Male NA NA 30 Wildtype Non-codel 126.57 55.79 CGGA_J50 Recurrent rOA WHO II Male 1693 1 27 Mutant NA 28.35 3.17 CGGA_J73 Primary AO WHO III Female 1134 1 34 Mutant NA 45.59 2.24 CGGA_P100 Primary GBM WHO IV Male 268 1 67 Wildtype Non-codel 605.93 9.03 CGGA_P102 Primary GBM WHO IV Male 1269 1 30 Mutant Non-codel 4.15 0.73 CGGA_P103 Primary O WHO II Male 1651 0 34 Mutant Codel 3.2 1.3 CGGA_P104 Recurrent rAOA WHO III Female 167 1 36 Mutant NA 0.93 0.33 CGGA_P106 Recurrent rGBM WHO IV Male 71 1 24 Wildtype Non-codel 2.52 1.34 CGGA_P107 Primary A WHO II Male NA NA 26 Mutant Non-codel 20.35 23.42 CGGA_P108 Primary AA WHO III Female 1644 0 30 Wildtype Non-codel 158.67 26.67 CGGA_P109 Recurrent rGBM WHO IV Male 407 1 35 Mutant Non-codel 4.68 0.21 CGGA_P11 Primary A WHO II Female NA NA 38 Mutant Non-codel 30.35 10.35 CGGA_P110 Primary AO WHO III Female 800 1 56 Wildtype Non-codel 78.34 8.84 CGGA_P111 Primary O WHO II Female 1638 0 44 Mutant Codel 22.64 4.65 CGGA_P112 Primary GBM WHO IV Male 834 1 65 Wildtype Non-codel 2.73 1.47 CGGA_P113 Primary A WHO II Male 1708 0 32 Wildtype Non-codel 1.56 1.04 CGGA_P114 Primary O WHO II Male NA 1 32 Mutant Codel 23.1 3.97 CGGA_P115 Primary A WHO II Male 1626 0 25 Wildtype NA 48.46 17.51 CGGA_P116 Primary GBM WHO IV Male 305 1 58 Wildtype NA 29.67 3.1 CGGA_P121 Primary A WHO II Male 1608 0 39 Wildtype Non-codel 7.38 0.43 CGGA_P122 Recurrent rO WHO II Male 1638 0 43 Mutant Codel 17.63 4.42 CGGA_P128 Primary A WHO II Male 1586 0 41 Mutant Non-codel 6.38 1.95 CGGA_P13 Primary O WHO II Female 1938 0 40 Mutant Codel 10.67 2.42 CGGA_P131 Primary AO WHO III Female 1596 0 45 Mutant Codel 19.11 6.69 CGGA_P132 Primary O WHO II Male 1603 0 42 Mutant Codel 23.15 5.8 CGGA_P136 Primary GBM WHO IV Female 842 1 41 Wildtype NA 0.43 0.06 CGGA_P137 Primary A WHO II Male 1526 0 42 Mutant Non-codel 21.96 3.27 CGGA_P142 Primary AO WHO III Male 1558 0 45 Mutant Codel 15.81 2.96 CGGA_P143 Primary GBM WHO IV Female 261 1 66 Wildtype Non-codel 4.27 5.7 CGGA_P144 Primary AA WHO III Male 1559 0 44 Mutant Non-codel 20.34 3.03 CGGA_P145 Primary A WHO II Male 308 1 53 Mutant Non-codel 17.7 2.27 CGGA_P146 Recurrent rA WHO II Male NA 0 31 Mutant Non-codel 1.27 0.6 CGGA_P147 Primary A WHO II Male 863 1 52 Mutant Non-codel 10.44 3.03 CGGA_P15 Primary GBM WHO IV Male 723 1 49 NA Non-codel 8.86 0.5 CGGA_P150 Primary A WHO II Male NA 0 34 Mutant Non-codel 30.09 6.36 CGGA_P151 Primary A WHO II Female 1582 0 46 Mutant Non-codel 46.21 3.51 CGGA_P153 Primary A WHO II Male 1484 0 45 Mutant NA 2.17 3.35 CGGA_P154 Primary GBM WHO IV Male NA NA 50 Mutant NA 1.92 0.19 CGGA_P155 Primary A WHO II Male 1483 0 50 Wildtype Non-codel 13.5 2.25 CGGA_P156 Primary O WHO II Male 1488 0 30 Mutant Codel 1.69 0.74 CGGA_P157 Primary AA WHO III Female 470 1 55 Wildtype Non-codel 2.32 0.74 CGGA_P158 Primary OA WHO II Male 1510 0 27 Mutant NA 1.05 3.32 CGGA_P159 Primary AA WHO III Male 211 1 59 Wildtype Non-codel 24.61 15.6 CGGA_P16 Primary GBM WHO IV Male NA NA 38 Mutant Codel 9.65 1.48 CGGA_P160 Primary GBM WHO IV Female 219 1 72 Wildtype Non-codel 5.67 7.08 CGGA_P163 Recurrent rAO WHO III Female 855 1 45 Mutant Non-codel 8.94 2.12 CGGA_P164 Primary GBM WHO IV Male 1553 0 27 Wildtype NA 0.57 0.04 CGGA_P165 Primary AOA WHO III Female 598 1 51 Mutant NA 3.13 0.32 CGGA_P17 Primary AO WHO III Male 1930 0 30 Mutant Codel 13.64 7.51 CGGA_P172 Primary AA WHO III Male 1049 1 33 Mutant NA 2.22 0.33 CGGA_P173 Primary A WHO II Male 1448 0 31 Mutant Non-codel 34.78 13.74 CGGA_P174 Primary O WHO II Male 1482 0 31 Mutant Codel 24.18 3.75 CGGA_P175 Recurrent rGBM WHO IV Male 183 1 45 Wildtype NA 0.66 0.39 CGGA_P176 Primary O WHO II Female 804 0 32 Mutant Codel 8.21 5.33 CGGA_P177 Primary A WHO II Male 1442 0 43 Wildtype Non-codel 143.06 12.17 CGGA_P178 Primary GBM WHO IV Female 1442 0 52 Wildtype NA 1.92 0.28 CGGA_P179 Primary A WHO II Female 1454 0 53 Mutant Non-codel 5.54 1.92 CGGA_P18 Primary AA WHO III Male 387 1 40 Mutant Non-codel 55.7 14.03 CGGA_P180 Primary GBM WHO IV Male 260 1 47 Mutant NA 0.82 0.27 CGGA_P181 Primary AA WHO III Female 238 1 21 Wildtype Non-codel 18.96 2.14 CGGA_P182 Recurrent rGBM WHO IV Female 1512 0 58 Wildtype Non-codel 4.63 4.95 CGGA_P183 Primary AO WHO III Male 1512 0 58 Mutant Codel 14.64 0.82 CGGA_P185 Recurrent rAA WHO III Female 502 1 41 Mutant Non-codel 4.63 1.56 CGGA_P19 Primary A WHO II Male 1924 0 39 Mutant Non-codel 19.74 9.46 CGGA_P199 Recurrent rGBM WHO IV Male 203 1 66 Wildtype Non-codel 4.21 0.46 CGGA_P20 Primary A WHO II Female 1923 0 58 Mutant Non-codel 35.23 5.77 CGGA_P205 Primary GBM WHO IV Male 583 1 66 Wildtype NA 0.14 0.01 CGGA_P21 Primary A WHO II Male 1922 0 25 Mutant Non-codel 25.51 0.89 CGGA_P22 Primary GBM WHO IV Male 406 1 62 Wildtype Non-codel 5.83 2.67 CGGA_P23 Primary AA WHO III Female 392 1 62 Wildtype NA 1.08 4.61 CGGA_P25 Primary GBM WHO IV Male 147 1 64 Wildtype NA 44.83 3.39 CGGA_P265 Primary AA WHO III Male 779 1 36 Wildtype NA 19.39 3.33 CGGA_P266 Primary AA WHO III Female 253 1 28 Wildtype NA 24.12 0.24 CGGA_P269 Recurrent rAO WHO III Female 511 1 47 Wildtype Codel 264.58 5.51 CGGA_P27 Primary A WHO II Female 413 0 37 Mutant Non-codel 33.29 7.18 CGGA_P270 Recurrent rA WHO II Male NA 1 33 Mutant Non-codel 25.77 6.03 CGGA_P271 Primary A WHO II Male 1376 0 42 Mutant NA 3.37 1.41 CGGA_P279 Recurrent rAO WHO III Female 1334 0 47 Mutant Codel 53.04 1.22 CGGA_P28 Primary GBM WHO IV Male 107 1 61 Wildtype Non-codel 3.58 6.38 CGGA_P280 Recurrent rGBM WHO IV Female 1342 0 52 Wildtype Non-codel 8.04 0.8 CGGA_P283 Recurrent rGBM WHO IV Male 1331 0 38 Wildtype Non-codel 2.53 11.78 CGGA_P286 Recurrent rO WHO II Female 658 0 57 Mutant Codel 43.55 0.27 CGGA_P29 Recurrent rAOA WHO III Female 103 1 22 Mutant NA 7.23 1.43 CGGA_P295 Recurrent rGBM WHO IV Male 273 1 46 Wildtype Non-codel 1.72 0.48 CGGA_P298 Recurrent rAO WHO III Female NA 0 50 Mutant Codel 28.1 5.64 CGGA_P3 Recurrent rAOA WHO III Male 2126 0 32 Mutant NA 1.12 0.52 CGGA_P30 Primary A WHO II Male 404 1 48 Wildtype Non-codel 1.21 0.31 CGGA_P306 Recurrent rO WHO II Male 922 1 49 Mutant Codel 83.24 2.34 CGGA_P308 Recurrent rAA WHO III Male 563 1 38 Mutant Non-codel 8.97 0.76 CGGA_P31 Primary A WHO II Male 1883 0 42 Wildtype Non-codel 4.61 1.36 CGGA_P310 Recurrent rAA WHO III Female 224 1 47 NA Codel 14.39 1.15 CGGA_P311 Recurrent rA WHO II Male 1247 0 36 Mutant Non-codel 208.37 5.64 CGGA_P314 Recurrent rAO WHO III Female 1238 0 34 Mutant Codel 15.24 0.95 CGGA_P315 Recurrent rA WHO II Female 451 1 47 Mutant Non-codel 25.5 0.97 CGGA_P316 Recurrent rA WHO II Male 567 0 44 NA Non-codel 3.65 0.56 CGGA_P319 Recurrent rAA WHO III Male 508 1 37 Mutant Non-codel 1.06 0.57 CGGA_P326 Recurrent rAA WHO III Female 1217 0 48 Mutant Non-codel 80.63 4.38 CGGA_P328 Recurrent rAA WHO III Female 580 1 54 Mutant Non-codel 149.99 17.68 CGGA_P335 Recurrent rGBM WHO IV Male 1203 0 42 Mutant Codel 6.41 0.51 CGGA_P337 Recurrent rAO WHO III Female 689 1 61 Mutant Codel 55.87 15.97 CGGA_P338 Recurrent rO WHO II Male 1198 0 51 Wildtype Non-codel 23.43 20.75 CGGA_P346 Recurrent rA WHO II Male 522 0 42 Mutant Non-codel 52.86 4.28 CGGA_P356 Recurrent rA WHO II Female 569 1 22 Mutant Non-codel 47.95 0.84 CGGA_P358 Recurrent rA WHO II Male 1168 0 44 Mutant Non-codel 58.07 3.23 CGGA_P364 Recurrent rAA WHO III Female 495 1 41 Mutant Non-codel 10.75 1.69 CGGA_P385 Recurrent rGBM WHO IV Male 1112 0 22 Wildtype Non-codel 2.64 1.55 CGGA_P388 Recurrent rAA WHO III Female 293 1 37 Mutant Non-codel 65.2 8.47 CGGA_P392 Recurrent rA WHO II Male 1099 0 35 Mutant Codel 22.49 2.34 CGGA_P399 Recurrent rO WHO II Female 1090 0 41 Mutant Codel 42.76 6 CGGA_P401 Recurrent rGBM WHO IV Male 788 1 31 Mutant Non-codel 31.68 12.72 CGGA_P411 Recurrent rGBM WHO IV Female 440 1 47 Mutant Non-codel 4.72 1.19 CGGA_P415 Recurrent rGBM WHO IV Female 195 1 56 Wildtype Non-codel 17.89 4.74 CGGA_P416 Recurrent rAO WHO III Male 1069 0 29 Mutant Codel 2.69 0.69 CGGA_P421 Recurrent rAA WHO III Male 308 1 26 Mutant Non-codel 5.3 1.44 CGGA_P422 Primary O WHO II Female 1091 0 41 Mutant Codel 13.52 0.88 CGGA_P437 Primary AO WHO III Female 1023 0 47 Mutant Codel 36.71 3.34 CGGA_P438 Recurrent rAO WHO III Male 1023 0 41 Mutant Codel 40.46 6.63 CGGA_P439 Recurrent rA WHO II Male 1022 0 45 Mutant Non-codel 73.73 8.94 CGGA_P446 Recurrent rAO WHO III Female 1009 0 47 Mutant Codel 7.65 5.37 CGGA_P461 Recurrent rAA WHO III Male 599 1 28 Mutant Non-codel 3.14 1.64 CGGA_P468 Primary AO WHO III Female 974 0 42 Mutant Codel 21.49 4.98 CGGA_P483 Recurrent rAA WHO III Male 299 1 41 Wildtype Non-codel 4.29 1.66 CGGA_P492 Recurrent rO WHO II Female 938 0 44 Mutant Codel 18.8 2.65 CGGA_P499 Recurrent rGBM WHO IV Female NA NA 69 Wildtype Non-codel 24.61 8.76 CGGA_P5 Recurrent rAA WHO III Female 378 1 45 Mutant Non-codel 4.69 1.4 CGGA_P500 Recurrent rO WHO II Female 930 0 34 Mutant Codel 31.22 4.77 CGGA_P501 Recurrent rA WHO II Male 926 0 27 Mutant Non-codel 48.05 7.68 CGGA_P505 Recurrent rA WHO II Male 924 0 34 Mutant Non-codel 47.5 4.64 CGGA_P508 Recurrent rAA WHO III Male 377 1 40 Mutant Non-codel 4.33 0.69 CGGA_P510 Recurrent rAO WHO III Male 912 0 42 Mutant Non-codel 144.54 20.22 CGGA_P512 Recurrent rGBM WHO IV Male 541 1 23 Wildtype Non-codel 200.92 19.68 CGGA_P520 Recurrent rAO WHO III Female 884 0 44 Mutant Codel 4.18 0.98 CGGA_P568 Recurrent rAO WHO III Female 218 1 23 Mutant Codel 58.85 3.99 CGGA_P585 Recurrent rGBM WHO IV Male 344 1 50 Wildtype Non-codel 705.05 21.64 CGGA_P594 Recurrent rAA WHO III Male 84 1 40 Wildtype Non-codel 6.8 100.99 CGGA_P596 Recurrent rGBM WHO IV Female 777 0 60 Mutant Codel 127.79 1.1 CGGA_P604 Recurrent rAA WHO III Female 262 1 15 Wildtype Non-codel 235.99 4.56 CGGA_P609 Primary GBM WHO IV Female 726 0 19 Wildtype Non-codel 495.44 9.03 CGGA_P610 Recurrent rGBM WHO IV Male 345 1 62 Wildtype NA 5.48 3.38 CGGA_P615 Recurrent rO WHO II Male NA NA 40 Mutant Codel 17.48 2.67 CGGA_P619 Recurrent rGBM WHO IV Female 236 1 66 Wildtype Non-codel 115.53 18.89 CGGA_P623 Primary AA WHO III Male NA NA 52 Mutant Non-codel 120.35 11.36 CGGA_P625 Recurrent rGBM WHO IV Female 161 1 46 Mutant Non-codel 14.9 8.59 CGGA_P633 Recurrent rAA WHO III Female 676 0 40 Mutant Non-codel 50.07 12.15 CGGA_P7 Recurrent rGBM WHO IV Male 110 1 45 Wildtype Non-codel 12.51 4.1 CGGA_P83 Primary A WHO II Female 1698 0 28 Mutant Non-codel 34.66 2.47 CGGA_P84 Primary A WHO II Female 1694 0 40 Mutant Non-codel 27.02 9.09 CGGA_P86 Primary O WHO II Female 1694 0 34 Mutant Codel 11.73 1.97 CGGA_P87 Recurrent rGBM WHO IV Male 240 1 32 Mutant Non-codel 5.44 1.58 CGGA_P89 Recurrent rGBM WHO IV Male 294 1 42 Wildtype Non-codel 178.82 26.18 CGGA_P93 Primary A WHO II Female 1678 0 45 Mutant Non-codel 44.59 6.24 CGGA_P98 Recurrent rAA WHO III Male 317 1 44 Mutant Non-codel 7.81 1.05 CGGA_P99 Recurrent rGBM WHO IV Male 679 0 52 Mutant Non-codel 10.33 2.11
data.file<-"data.txt" geneA<-"CDKN2A" geneB<-"CDKN2B" ## load R package library(ggplot2) library(ggpubr) library(gridExtra) ## import data dat<-read.table(data.file, sep='\t', head=T) rownames(dat)<-dat$CGGA.ID #head(dat) mat<-dat[!is.na(dat$PRS.type)&(dat$PRS.type=="Primary"|dat$PRS.type=="Recurrent")& !is.na(dat$Histology)& !is.na(dat$Grade)& !is.na(dat$Gender)& !is.na(dat$Age)& !is.na(dat$IDH.mutation.status)& !is.na(dat$X1p19q.codel.status),] mat$Gene.A.Expression<-log1p(mat$Gene.A.Expression) mat$Gene.B.Expression<-log1p(mat$Gene.B.Expression) ### 1.primary tmp.data<-mat[mat$PRS.type=="Primary",] cortest<-cor.test(tmp.data$Gene.A.Expression,tmp.data$Gene.B.Expression) R.value<-round(cortest$estimate[[1]],3) P.value<-format(cortest$p.value,scientific=T,digits=3) ptext<-paste0("R = ",R.value,", P = ",P.value) dat_text <- data.frame(Gene.A.Expression=min(tmp.data$Gene.A.Expression)+1, Gene.B.Expression=max(tmp.data$Gene.B.Expression)+0.5, label = ptext, IDH.mutation.status=NA, Histology=NA, Grade = NA, fill_color=NA, CGGA.ID=NA, X1p19q.codel.status=NA, Age=NA, Gender=NA, PRS.type=NA ) mat.all.Primary.plot<-ggplot(tmp.data,aes(x=Gene.A.Expression, y=Gene.B.Expression, Sample=CGGA.ID, Histology=Histology, Grade=Grade, X1p19q.codel.status=X1p19q.codel.status, IDH.mutation.status=IDH.mutation.status, Age=Age, Gender=Gender, PRS.type=PRS.type))+ geom_point()+ geom_text(data=dat_text,aes(label = label))+ geom_smooth(formula = y~x,aes(group=1),method='lm')+ xlab(paste0('Gene expression of ',geneA))+ ylab(paste0('Gene expression of ',geneB))+ labs(title = 'All WHO grade (primary glioma)')+ theme(text = element_text(size=10),plot.margin = unit(c(1,1,1,1), 'cm')) ### 2. Recurrent tmp.data<-mat[mat$PRS.type=="Recurrent",] cortest<-cor.test(tmp.data$Gene.A.Expression,tmp.data$Gene.B.Expression) R.value<-round(cortest$estimate[[1]],3) P.value<-format(cortest$p.value,scientific=T,digits=3) ptext<-paste0("R = ",R.value,", P = ",P.value) dat_text <- data.frame(Gene.A.Expression=min(tmp.data$Gene.A.Expression)+1, Gene.B.Expression=max(tmp.data$Gene.B.Expression)+0.5, label = ptext, IDH.mutation.status=NA, Histology=NA, Grade = NA, fill_color=NA, CGGA.ID=NA, X1p19q.codel.status=NA, Age=NA, Gender=NA, PRS.type=NA ) mat.all.Recurrent.plot<-ggplot(tmp.data,aes(x=Gene.A.Expression, y=Gene.B.Expression, Sample=CGGA.ID, Histology=Histology, Grade=Grade, X1p19q.codel.status=X1p19q.codel.status, IDH.mutation.status=IDH.mutation.status, Age=Age, Gender=Gender, PRS.type=PRS.type))+ geom_point()+ geom_text(data=dat_text,aes(label = label))+ geom_smooth(formula = y~x,aes(group=1),method='lm')+ xlab(paste0('Gene expression of ',geneA))+ ylab(paste0('Gene expression of ',geneB))+ labs(title = 'All WHO grade (recurrent glioma)')+ theme(text = element_text(size=10),plot.margin = unit(c(1,1,1,1), 'cm')) ### 3.Primary.II tmp.data<-mat[mat$PRS.type=="Primary"&mat$Grade=="WHO II",] cortest<-cor.test(tmp.data$Gene.A.Expression,tmp.data$Gene.B.Expression) R.value<-round(cortest$estimate[[1]],3) P.value<-format(cortest$p.value,scientific=T,digits=3) ptext<-paste0("R = ",R.value,", P = ",P.value) dat_text <- data.frame(Gene.A.Expression=min(tmp.data$Gene.A.Expression)+1, Gene.B.Expression=max(tmp.data$Gene.B.Expression)+0.5, label = ptext, IDH.mutation.status=NA, Histology=NA, Grade = NA, fill_color=NA, CGGA.ID=NA, X1p19q.codel.status=NA, Age=NA, Gender=NA, PRS.type=NA ) mat.Primary.II.plot<-ggplot(tmp.data,aes(x=Gene.A.Expression, y=Gene.B.Expression, Sample=CGGA.ID, Histology=Histology, Grade=Grade, X1p19q.codel.status=X1p19q.codel.status, IDH.mutation.status=IDH.mutation.status, Age=Age, Gender=Gender, PRS.type=PRS.type))+ geom_point()+ geom_text(data=dat_text,aes(label = label))+ geom_smooth(formula = y~x,aes(group=1),method='lm')+ xlab(paste0('Gene expression of ',geneA))+ ylab(paste0('Gene expression of ',geneB))+ labs(title = 'WHO grade II (primary glioma)') theme(text = element_text(size=10),plot.margin = unit(c(1,1,1,1), 'cm')) ### 4.Recurrent.II tmp.data<-mat[mat$PRS.type=="Recurrent"&mat$Grade=="WHO II",] cortest<-cor.test(tmp.data$Gene.A.Expression,tmp.data$Gene.B.Expression) R.value<-round(cortest$estimate[[1]],3) P.value<-format(cortest$p.value,scientific=T,digits=3) ptext<-paste0("R = ",R.value,", P = ",P.value) dat_text <- data.frame(Gene.A.Expression=min(tmp.data$Gene.A.Expression)+1, Gene.B.Expression=max(tmp.data$Gene.B.Expression)+0.5, label = ptext, IDH.mutation.status=NA, Histology=NA, Grade = NA, fill_color=NA, CGGA.ID=NA, X1p19q.codel.status=NA, Age=NA, Gender=NA, PRS.type=NA ) mat.Recurrent.II.plot<-ggplot(tmp.data,aes(x=Gene.A.Expression, y=Gene.B.Expression, Sample=CGGA.ID, Histology=Histology, Grade=Grade, X1p19q.codel.status=X1p19q.codel.status, IDH.mutation.status=IDH.mutation.status, Age=Age, Gender=Gender, PRS.type=PRS.type))+ geom_point()+ geom_text(data=dat_text,aes(label = label))+ geom_smooth(formula = y~x,aes(group=1),method='lm')+ xlab(paste0('Gene expression of ',geneA))+ ylab(paste0('Gene expression of ',geneB))+ labs(title = 'WHO grade II (recurrent glioma)')+ theme(text = element_text(size=10),plot.margin = unit(c(1,1,1,1), 'cm')) ### 5.Primary.III tmp.data<-mat[mat$PRS.type=="Primary"&mat$Grade=="WHO III",] cortest<-cor.test(tmp.data$Gene.A.Expression,tmp.data$Gene.B.Expression) R.value<-round(cortest$estimate[[1]],3) P.value<-format(cortest$p.value,scientific=T,digits=3) ptext<-paste0("R = ",R.value,", P = ",P.value) dat_text <- data.frame(Gene.A.Expression=min(tmp.data$Gene.A.Expression)+1, Gene.B.Expression=max(tmp.data$Gene.B.Expression)+0.5, label = ptext, IDH.mutation.status=NA, Histology=NA, Grade = NA, fill_color=NA, CGGA.ID=NA, X1p19q.codel.status=NA, Age=NA, Gender=NA, PRS.type=NA ) mat.Primary.III.plot<-ggplot(tmp.data,aes(x=Gene.A.Expression, y=Gene.B.Expression, Sample=CGGA.ID, Histology=Histology, Grade=Grade, X1p19q.codel.status=X1p19q.codel.status, IDH.mutation.status=IDH.mutation.status, Age=Age, Gender=Gender, PRS.type=PRS.type))+ geom_point()+ geom_text(data=dat_text,aes(label = label))+ geom_smooth(formula = y~x,aes(group=1),method='lm')+ xlab(paste0('Gene expression of ',geneA))+ ylab(paste0('Gene expression of ',geneB))+ labs(title = 'WHO grade III (primary glioma)')+ theme(text = element_text(size=10),plot.margin = unit(c(1,1,1,1), 'cm')) ### 6.Recurrent.III tmp.data<-mat[mat$PRS.type=="Recurrent"&mat$Grade=="WHO III",] cortest<-cor.test(tmp.data$Gene.A.Expression,tmp.data$Gene.B.Expression) R.value<-round(cortest$estimate[[1]],3) P.value<-format(cortest$p.value,scientific=T,digits=3) ptext<-paste0("R = ",R.value,", P = ",P.value) dat_text <- data.frame(Gene.A.Expression=min(tmp.data$Gene.A.Expression)+1, Gene.B.Expression=max(tmp.data$Gene.B.Expression)+0.5, label = ptext, IDH.mutation.status=NA, Histology=NA, Grade = NA, fill_color=NA, CGGA.ID=NA, X1p19q.codel.status=NA, Age=NA, Gender=NA, PRS.type=NA ) mat.Recurrent.III.plot<-ggplot(tmp.data,aes(x=Gene.A.Expression, y=Gene.B.Expression, Sample=CGGA.ID, Histology=Histology, Grade=Grade, X1p19q.codel.status=X1p19q.codel.status, IDH.mutation.status=IDH.mutation.status, Age=Age, Gender=Gender, PRS.type=PRS.type))+ geom_point()+ geom_text(data=dat_text,aes(label = label))+ geom_smooth(formula = y~x,aes(group=1),method='lm')+ xlab(paste0('Gene expression of ',geneA))+ ylab(paste0('Gene expression of ',geneB))+ labs(title = 'WHO grade III (recurrent glioma)')+ theme(text = element_text(size=10),plot.margin = unit(c(1,1,1,1), 'cm')) ### 7.Primary.IV tmp.data<-mat[mat$PRS.type=="Primary"&mat$Grade=="WHO IV",] cortest<-cor.test(tmp.data$Gene.A.Expression,tmp.data$Gene.B.Expression) R.value<-round(cortest$estimate[[1]],3) P.value<-format(cortest$p.value,scientific=T,digits=3) ptext<-paste0("R = ",R.value,", P = ",P.value) dat_text <- data.frame(Gene.A.Expression=min(tmp.data$Gene.A.Expression)+1, Gene.B.Expression=max(tmp.data$Gene.B.Expression)+0.5, label = ptext, IDH.mutation.status=NA, Histology=NA, Grade = NA, fill_color=NA, CGGA.ID=NA, X1p19q.codel.status=NA, Age=NA, Gender=NA, PRS.type=NA ) mat.Primary.IV.plot<-ggplot(tmp.data,aes(x=Gene.A.Expression, y=Gene.B.Expression, Sample=CGGA.ID, Histology=Histology, Grade=Grade, X1p19q.codel.status=X1p19q.codel.status, IDH.mutation.status=IDH.mutation.status, Age=Age, Gender=Gender, PRS.type=PRS.type))+ geom_point()+ geom_text(data=dat_text,aes(label = label))+ geom_smooth(formula = y~x,aes(group=1),method='lm')+ xlab(paste0('Gene expression of ',geneA))+ ylab(paste0('Gene expression of ',geneB))+ labs(title = 'WHO grade IV (primary glioma)')+ theme(text = element_text(size=10),plot.margin = unit(c(1,1,1,1), 'cm')) ### 8.Recurrent.IV tmp.data<-mat[mat$PRS.type=="Recurrent"&mat$Grade=="WHO IV",] cortest<-cor.test(tmp.data$Gene.A.Expression,tmp.data$Gene.B.Expression) R.value<-round(cortest$estimate[[1]],3) P.value<-format(cortest$p.value,scientific=T,digits=3) ptext<-paste0("R = ",R.value,", P = ",P.value) dat_text <- data.frame(Gene.A.Expression=min(tmp.data$Gene.A.Expression)+1, Gene.B.Expression=max(tmp.data$Gene.B.Expression)+0.5, label = ptext, IDH.mutation.status=NA, Histology=NA, Grade = NA, fill_color=NA, CGGA.ID=NA, X1p19q.codel.status=NA, Age=NA, Gender=NA, PRS.type=NA ) mat.Recurrent.IV.plot<-ggplot(tmp.data,aes(x=Gene.A.Expression, y=Gene.B.Expression, Sample=CGGA.ID, Histology=Histology, Grade=Grade, X1p19q.codel.status=X1p19q.codel.status, IDH.mutation.status=IDH.mutation.status, Age=Age, Gender=Gender, PRS.type=PRS.type))+ geom_point()+ geom_text(data=dat_text,aes(label = label))+ geom_smooth(formula = y~x,aes(group=1),method='lm')+ xlab(paste0('Gene expression of ',geneA))+ ylab(paste0('Gene expression of ',geneB))+ labs(title = 'WHO grade IV (recurrent glioma)')+ theme(text = element_text(size=10),plot.margin = unit(c(1,1,1,1), 'cm')) ## output pdf grid.arrange(mat.all.Primary.plot, mat.all.Recurrent.plot, mat.Primary.II.plot, mat.Recurrent.II.plot, mat.Primary.III.plot, mat.Recurrent.III.plot, mat.Primary.IV.plot, mat.Recurrent.IV.plot, ncol = 2,nrow=4)
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