circRNA basic information
circBase ID: hsa_circ_0012634
Name: hsa_circ_TMEM59
Synonym: -
Host Gene: TMEM59
Genomic location(hg19): chr1:54506428-54509198:-
Genomic location(hg38): chr1:54040755-54043525:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005184
MONDO name: pancreatic ductal adenocarcinoma
Disease details: pancreatic ductal adenocarcinoma / PDAC
Disease DO ID:
3498, 3587
Disease MeSH ID:
D021441
Disease NCIt ID:
C9120
Disease ICD11 ID:
581089833
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

PDAC tumor tissues; adjacent normal tissues; serum; serum exosomes; mice tumor tissues

Cell lines:

PANC-1; BxPC-3; MIA PaCa-2; Capan-2; HPDE

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: HIPK2
Associated microRNA: miR-147b
Biological function: Suppresses PDAC cell proliferation and glycolysis and enhances apoptosis; inhibits tumorigenesis in vivo; exosomal hsa_circ_0012634 represses PDAC cell behaviors.
Molecular mechanism: Acts as a miRNA sponge for miR-147b to upregulate HIPK2 (ceRNA axis), thereby suppressing PDAC progression; exosome-transmitted hsa_circ_0012634 exerts similar effects.
Biological pathway or process:

proliferation (inhibits); apoptosis (promotes); glycolysis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; Nuclear-Cytoplasmic Fractionation; RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Annexin V/PI Flow Cytometry; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); ROC Analysis; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

Low expression in serum exosomes of PDAC patients; ROC AUC 0.868 suggests diagnostic potential; proposed diagnosis and treatment biomarker for PDAC.

Description:

hsa_circ_0012634 is down-regulated in PDAC tissues/cells and in serum exosomes from PDAC patients. Functionally, its overexpression (including exosome-delivered form) inhibits PDAC proliferation and glycolysis and promotes apoptosis by sponging miR-147b to derepress HIPK2, reducing tumor growth in a PANC-1 xenograft model and showing diagnostic potential by ROC analysis.

Confidence score:

0.8657

Other information
Title:

Exosome-transmitted hsa_circ_0012634 suppresses pancreatic ductal adenocarcinoma progression through regulating miR-147b/HIPK2 axis.

Journal: Cancer biology & therapy
Published: 2023
PubMed ID: 37326330
Study type:

combined biological and clinical study

Data availability: GSE69362; https://doi.org/10.1080/15384047.2023.2218514
Code availability: -