circRNA basic information
circBase ID: hsa_circ_0000994
Name: hsa_circ_SLC8A1
Synonym: circSLC8A1
Host Gene: SLC8A1
Genomic location(hg19): chr2:40655612-40657444:-
Genomic location(hg38): chr2:40428472-40430304:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004986
MONDO name: urinary bladder carcinoma
Disease details: bladder cancer
Disease DO ID:
4007
Disease MeSH ID:
-
Disease NCIt ID:
C4912
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

bladder cancer tissues; adjacent normal tissues; tumor tissues (xenograft)

Cell lines:

5637; T24; J82; EJ; UMUC; RT4; SV-HUC-1; HEK293

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: PTEN
Associated microRNA: miR-130b, miR-494
Biological function: inhibits migration; inhibits invasion; inhibits proliferation; suppresses tumor growth
Molecular mechanism: circSLC8A1 directly binds miR-130b and miR-494 and acts as a miRNA sponge to regulate PTEN expression and downstream PI3K/Akt signaling.
Biological pathway or process:

migration (inhibits); invasion (inhibits); proliferation (inhibits); PI3K/AKT (inhibits); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RNA Pull-Down; Luciferase Reporter Assay; FISH / smFISH; Transfection; CCK8; Wound Healing Assay; Transwell Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; H&E Staining; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

circSLC8A1 expression was associated with the pathological stage and histological grade of bladder cancer; may provide a potential biomarker and therapeutic target for the management of bladder cancer.

Description:

In bladder cancer, circSLC8A1 is down-regulated and functions as a tumor suppressor. It sponges miR-130b and miR-494 to de-repress PTEN, thereby inhibiting PI3K/Akt-related signaling and reducing proliferation, migration, invasion, and xenograft growth.

Confidence score:

0.8634

Other information
Title:

Circular RNA circSLC8A1 acts as a sponge of miR-130b/miR-494 in suppressing bladder cancer progression via regulating PTEN.

Journal: Molecular cancer
Published: 2019
PubMed ID: 31228937
Study type:

combined biological and clinical study

Data availability: Please contact the corresponding author for all data requests.
Code availability: -