circRNA basic information
circBase ID: hsa_circ_0000092
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr1:93305053-93305167:+
Genomic location(hg38): chr1:92839496-92839610:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; adjacent normal tissues; tumour tissues

Cell lines:

Hep3B; LM3; MHCC97L; SK-hep1; HepG2; THLE-2; HUVECs

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: HN1
Associated microRNA: miR-338-3p
Biological function: promotes HCC cell proliferation, migration, invasion and angiogenesis; promotes tumour growth in vivo
Molecular mechanism: ceRNA mechanism: hsa_circ_0000092 sponges miR-338-3p to up-regulate HN1
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); angiogenesis (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Northern Blot; FISH / smFISH; Luciferase Reporter Assay; RNA Pull-Down; Transfection; EdU Staining; Colony Formation Assay; Wound Healing Assay; Transwell Assay; Tube Formation Assay; In Vivo Animal Model; ISH (In Situ Hybridization); IHC (Immunohistochemistry); Western Blot; Bioinformatics Analysis

Clinical significance:

hsa_circ_0000092 expression was positively correlated with tumour node metastasis (TNM) stage and metastasis; potential candidate marker and therapeutic target for HCC

Description:

hsa_circ_0000092 is up-regulated in HCC tissues and cell lines and mainly localizes to the cytoplasm. It promotes HCC progression by acting as a ceRNA that sponges miR-338-3p, thereby up-regulating HN1 and enhancing proliferation, migration, invasion and angiogenesis, and its silencing suppresses tumour growth in vivo.

Confidence score:

0.7489

Other information
Title:

hsa_circ_0000092 promotes hepatocellular carcinoma progression through up-regulating HN1 expression by binding to microRNA-338-3p.

Journal: Journal of cellular and molecular medicine
Published: 2024
PubMed ID: 32077624
Study type:

combined biological and clinical study

Data availability: GSE94508; GSE45267
Code availability: -