circRNA basic information
circBase ID: hsa_circ_0000073
Name: hsa_circ_OMA1
Synonym: -
Host Gene: OMA1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tissues; adjacent normal tissues; tumor; adjacent normal tissue

Cell lines:

MCF-10A; MDA-MB-468; MDA-MB-231; BT-549; MCF-7; 293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: SIRT4, Ago2
Associated microRNA: miR-1276
Biological function: Promotes viability/proliferation, migration and invasion; inhibits apoptosis in breast cancer cells.
Molecular mechanism: Acts as a ceRNA/miRNA sponge for miR-1276, relieving repression of SIRT4; associates with Ago2 and validated by reporter/pull-down/RIP assays.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; Transwell Assay; Annexin V/PI Flow Cytometry; Western Blot; Clinical Sample Validation; Survival Analysis; ROC Analysis; Bioinformatics Analysis

Clinical significance:

High circOMA1 expression is associated with tumor size and lymph node metastasis; discriminates BC tissues from adjacent normal tissues (ROC AUC 0.8296); high expression predicts poorer overall survival.

Description:

circOMA1 (hsa_circRNA_0000073, derived from OMA1) is up-regulated in breast cancer and associated with larger tumor size, lymph node metastasis, and poorer overall survival. It mainly localizes in the cytoplasm and promotes malignant phenotypes by sponging miR-1276 to increase SIRT4 expression, forming a circOMA1/miR-1276/SIRT4 ceRNA axis.

Confidence score:

0.8761

Other information
Title:

Circular RNA OMA1 regulates the progression of breast cancer via modulation of the miR‑1276/SIRT4 axis.

Journal: Molecular medicine reports
Published: 2021
PubMed ID: 34414449
Study type:

combined biological and clinical study

Data availability: The datasets used and/or analyzed during the current study are available from the corresponding author on reasonable request.
Code availability: -