circRNA basic information
circBase ID: hsa_circ_0050386
Name: hsa_circ_ANKRD27
Synonym: -
Host Gene: ANKRD27
Genomic location(hg19): chr19:33113327-33116872:-
Genomic location(hg38): chr19:32622421-32625966:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer / NSCLC
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC tissues; adjacent normal tissues / non-tumor tissues

Cell lines:

A549; PC9; H1299; H520; H292; H358; H1795; H460; H1703; 16HBE; HEK-293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: SRSF3, FN1
Associated microRNA: -
Biological function: Suppresses NSCLC cell proliferation, cell cycle progression, migration, invasion, tumor growth and metastasis.
Molecular mechanism: Binds the RBP SRSF3 to down-regulate FN1 expression (SRSF3/FN1 axis).
Biological pathway or process:

proliferation (inhibits); cell cycle (inhibits); migration (inhibits); invasion (inhibits); metastasis (inhibits)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; divergent primers PCR; RNase R Treatment; Sanger Sequencing; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Transfection; Colony Formation Assay; Cell Cycle Assay; Annexin V/PI Flow Cytometry; Transwell Assay; RNA Pull-Down; RIP (RNA Immunoprecipitation); Western Blot; RNA-seq; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

Decreased expression is associated with larger primary tumor size and advanced/worse clinical stage; potential biomarker and therapeutic target.

Description:

hsa_circ_0050386 is down-regulated in NSCLC tissues and cell lines and acts as a tumor suppressor. It inhibits NSCLC proliferation, cell-cycle progression, migration/invasion, tumor growth and lung metastasis by binding the RBP SRSF3 and reducing FN1 expression (SRSF3/FN1 axis). Decreased hsa_circ_0050386 levels are associated with larger tumor size and more advanced clinical stage.

Confidence score:

0.8671

Other information
Title:

Circular RNA hsa_circ_0050386 suppresses non-small cell lung cancer progression via regulating the SRSF3/FN1 axis.

Journal: Journal of translational medicine
Published: 2024
PubMed ID: 38216996
Study type:

combined biological and clinical study

Data availability: Data sets used during the current study were available from the corresponding authors upon reasonable request.
Code availability: -