circRNA basic information
circBase ID: hsa_circ_0006835
Name: hsa_circ_NHSL1
Synonym: circNHSL1
Host Gene: NHSL1
Genomic location(hg19): chr6:138794442-138817508:-
Genomic location(hg38): chr6:138473305-138496371:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; serum exosomes

Cell lines:

HGC-27; AGS; GES-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: YWHAZ, ASCT2, GLS1
Associated microRNA: miR-149-5p
Biological function: promotes migration, invasion, glutaminolysis and tumor growth
Molecular mechanism: acts as a ceRNA by sponging miR-149-5p to regulate YWHAZ expression
Biological pathway or process:

migration (promotes); invasion (promotes); glutaminolysis (promotes); proliferation (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Transfection; Transwell Assay; Western Blot; RNA Pull-Down; Luciferase Reporter Assay; In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

high circNHSL1 expression was associated with tumor size, TNM stages, lymphatic metastasis, and distant metastasis; proposed as a potential biomarker for prognosis

Description:

circNHSL1 is up-regulated in gastric cancer tissues, cells, and serum/cell-derived exosomes. It promotes GC migration, invasion, glutaminolysis and in vivo tumor growth by acting as a ceRNA that sponges miR-149-5p to increase YWHAZ expression.

Confidence score:

0.7759

Other information
Title:

Circular RNA circNHSL1 Contributes to Gastric Cancer Progression Through the miR-149-5p/YWHAZ Axis.

Journal: Cancer management and research
Published: 2020
PubMed ID: 32848466
Study type:

combined biological and clinical study

Data availability: TCGA (STAD)
Code availability: -