circRNA basic information
circBase ID: hsa_circ_0001633
Name: hsa_circ_SOBP
Synonym: circSOBP
Host Gene: SOBP
Genomic location(hg19): chr6:107824860-107827631:+
Genomic location(hg38): chr6:107503656-107506427:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004986
MONDO name: urinary bladder carcinoma
Disease details: bladder cancer / BCa
Disease DO ID:
4007
Disease MeSH ID:
-
Disease NCIt ID:
C4912
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BCa tissues; matched adjacent normal urothelial (MANU) tissues; tumor samples (before and after immunotherapy)

Cell lines:

T24; EJ; 253J; 5637; SV-HUC-1; HEK-293T; T24-luc

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: PTEN, PD-1/PD-L1 pathway
Associated microRNA: miR-200a-3p
Biological function: inhibits proliferation; inhibits migration; inhibits invasion; inhibits tumor growth; inhibits metastasis; associated with immunotherapy response
Molecular mechanism: ceRNA mechanism: circSOBP sponges miR-200a-3p to upregulate PTEN; may be involved in PD-1/PD-L1-related immune response
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); metastasis (inhibits); ceRNA regulation (other); immune regulation (other); PI3K/AKT (other)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Actinomycin D / DRB Stability Assay; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RNA Pull-Down; Luciferase Reporter Assay; Bioinformatics Analysis; Transfection; CCK8; Colony Formation Assay; Wound Healing Assay; Transwell Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; H&E Staining; Survival Analysis; ROC Analysis

Clinical significance:

Lower circSOBP expression was associated with more advanced pathological stage, larger tumor size, and poorer overall survival; ROC AUC 0.792 for distinguishing BCa and normal tissues; higher circSOBP after immunotherapy associated with better treatment outcome in responders

Description:

circSOBP (hsa_circ_0001633) is down-regulated in bladder cancer and acts as a tumor suppressor by inhibiting proliferation, migration, invasion, tumor growth and metastasis. It primarily localizes to the cytoplasm and functions as a ceRNA by sponging miR-200a-3p to increase PTEN expression. Clinically, higher circSOBP is associated with better overall survival and may correlate with response to PD-1/PD-L1-based immunotherapy.

Confidence score:

0.8889

Other information
Title:

circSOBP Inhibits Bladder Cancer Proliferation and Metastasis by Regulating the miR-200a-3p/PTEN Axis and Participating in the Immune Response.

Journal: Cell transplantation
Published: 2023
PubMed ID: 37026617
Study type:

combined biological and clinical study

Data availability: TCGA (https://portal.gdc.cancer.gov)
Code availability: -