circRNA basic information
circBase ID: hsa_circ_0004872
Name: hsa_circ_MAPK1
Synonym: -
Host Gene: MAPK1
Genomic location(hg19): chr22:22153300-22162135:-
Genomic location(hg38): chr22:21799011-21807846:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005133
MONDO name: endometriosis
Disease details: peritoneal endometriosis-associated infertility
Disease DO ID:
289
Disease MeSH ID:
D004715
Disease NCIt ID:
C3014
Disease ICD11 ID:
1838213761
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

cumulus cells (CCs)

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: mRNAs (59 in PEM-TFI network, 120 in PEM-OEM network)
Associated microRNA: hsa-miR-608, hsa-miR-638, hsa-miR-4469, hsa-miR-4721, hsa-miR-6895-5p
Biological function: May influence oocyte quality and competence in patients with PEM.
Molecular mechanism: ceRNA mechanism with predicted miRNA sponging and downstream mRNAs via constructed circRNA-miRNA-mRNA networks.
Biological pathway or process:

ceRNA regulation (other); apoptosis (other); PI3K/AKT (other); p53 signaling (other); JAK/STAT (other); TGF-beta/SMAD (other)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

May be used as a potential biomarker to help noninvasively identify whether infertility patients have concealed PEM and whether OEM affected patients have concomitant PEM lesions.

Description:

hsa_circ_0004872 is significantly upregulated in cumulus cells from patients with peritoneal endometriosis-associated infertility versus OEM and TFI controls. The study constructed a predicted ceRNA network for this circRNA (binding five miRNAs and many downstream mRNAs), suggesting it may contribute to impaired oocyte quality/competence and could serve as a noninvasive biomarker for concealed PEM.

Confidence score:

0.4032

Other information
Title:

Bioinformatic analysis confirms differences in circular RNA expression profiles of cumulus cells between patients with ovarian and peritoneal endometriosis-associated infertility.

Journal: Frontiers in endocrinology
Published: 2023
PubMed ID: 37008951
Study type:

combined biological and clinical study

Data availability: https://ngdc.cncb.ac.cn/gsa-human/, HRA003694
Code availability: -