circRNA basic information
circBase ID: hsa_circ_0004592
Name: hsa_circ_STK3
Synonym: circSTK3
Host Gene: STK3
Genomic location(hg19): chr8:99718694-99719539:-
Genomic location(hg38): chr8:98706466-98707311:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; adjacent normal tissues

Cell lines:

HCT116; HT29

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: CTCF, HOXB1, PDE4D
Associated microRNA: -
Biological function: promotes migration and invasion; promotes metastasis; induces EMT
Molecular mechanism: circSTK3 is transcriptionally regulated by CTCF and promotes CRC metastasis by inducing EMT programming; associated with metastasis-related gene-expression changes including HOXB1 and PDE4D modulation.
Biological pathway or process:

migration (promotes); invasion (promotes); metastasis (promotes); EMT (promotes); Hippo/YAP (other)

Detected method:
Q
H
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; ISH (In Situ Hybridization); Clinical Sample Validation; Survival Analysis; Transfection; Transwell Assay; Wound Healing Assay; CCK8; Cell Cycle Assay; Western Blot; IF (Immunofluorescence); ChIP / ChIP-seq; In Vivo Animal Model; H&E Staining; Bioinformatics Analysis

Clinical significance:

Upregulation/high expression of circSTK3 is associated with poor prognosis and decreased survival; circSTK3 is an independent prognostic factor in CRC.

Description:

circSTK3 (hsa_circ_0004592), derived from STK3, is up-regulated in colorectal cancer tissues and is mainly localized in the cytoplasm. Functional assays show it promotes CRC cell migration, invasion, and in vivo lung metastasis by inducing EMT programs, and its high expression predicts poor overall survival; CTCF transcriptionally promotes circSTK3 expression.

Confidence score:

0.7956

Other information
Title:

CircSTK3 drives the metastasis of colorectal cancer by regulating epithelial-mesenchymal transition.

Journal: iScience
Published: 2023
PubMed ID: 36922993
Study type:

combined biological and clinical study

Data availability: GSE223001; GSE222838
Code availability: -