circRNA basic information
circBase ID: hsa_circ_0078607
Name: hsa_circ_SLC22A3
Synonym: -
Host Gene: SLC22A3
Genomic location(hg19): chr6:160819010-160831878:+
Genomic location(hg38): chr6:160397978-160410846:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008170
MONDO name: ovarian cancer
Disease details: ovarian cancer / OC
Disease DO ID:
2394
Disease MeSH ID:
D010051
Disease NCIt ID:
C7431
Disease ICD11 ID:
685124533
Disease OMIM ID:
167000
Species: Human
Species details: Homo sapiens
Tissue specimen:

OC specimens; paired normal tissues; tumour tissue; xenograft tumours

Cell lines:

A2780; SKOV3; A2780/DDP; SKOV3/DDP; IOSE-80

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: GAS7
Associated microRNA: miR-196b-5p
Biological function: increases cisplatin (DDP) sensitivity, inhibits DDP resistance, restrains cell growth, and induces apoptosis in DDP-resistant ovarian cancer cells
Molecular mechanism: ceRNA mechanism: circ_0078607 sponges miR-196b-5p to up-regulate GAS7, thereby enhancing cisplatin sensitivity
Biological pathway or process:

chemoresistance (inhibits); apoptosis (promotes); proliferation (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Bioinformatics Analysis; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); Clinical Sample Validation; Cohort Study; Survival Analysis

Clinical significance:

low circ_0078607 expression indicated a decrease in overall survival and was significantly associated with clinical stage and venous invasion

Description:

circ_0078607 is down-regulated in ovarian cancer tissues and cisplatin-resistant cells and functions as a cytoplasmic ceRNA. By sponging miR-196b-5p, it up-regulates GAS7, suppresses malignant phenotypes, and increases cisplatin (DDP) sensitivity in vitro and in xenograft models; low circ_0078607 is associated with worse overall survival.

Confidence score:

0.8656

Other information
Title:

Circ_0078607 increases platinum drug sensitivity via miR-196b-5p/GAS7 axis in ovarian cancer.

Journal: Epigenetics
Published: 2023
PubMed ID: 36908025
Study type:

combined biological and clinical study

Data availability: The datasets used and/or analyzed during the current study are available from the corresponding author on reasonable request.
Code availability: -