circRNA basic information
circBase ID: -
Name: hsa_circ_MYH9
Synonym: circMYH9
Host Gene: MYH9
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0003864
MONDO name: chronic lymphocytic leukemia/small lymphocytic lymphoma
Disease details: chronic lymphocytic leukemia / CLL
Disease DO ID:
6354
Disease MeSH ID:
-
Disease NCIt ID:
C27911
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

CLL lymphocytes; healthy B-cells / normal B-cells / healthy B-lymphocytes

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: NCK2, CBL, STAM2
Associated microRNA: -
Biological function: associated with CLL cancer progression (possible impacts on angiogenesis, B-cell activation, and EGFR signaling)
Molecular mechanism: bioinformatically inferred interaction with NCK2/CBL/STAM2 impacting angiogenesis, B-cell activation, and EGFR signaling pathway
Biological pathway or process:

angiogenesis (other); EGFR (other); other pathway/process (other)

Detected method:
S
Validation methods:

RNA-seq; Bioinformatics Analysis; ROC Analysis; Survival Analysis; Cohort Study

Clinical significance:

Diagnostic biomarker (AUC reported) and prognostic association with 5-year OS (high level associated with worse OS).

Description:

circMYH9 is increased in CLL and is part of a four-circRNA diagnostic/prognostic signature. Network analysis links circMYH9 with NCK2/CBL/STAM2 and suggests impacts on angiogenesis, B-cell activation and EGFR signaling; higher expression is associated with worse OS in validation cohorts.

Confidence score:

0.5121

Other information
Title:

Circular RNA Expression Signatures Provide Promising Diagnostic and Therapeutic Biomarkers for Chronic Lymphocytic Leukemia.

Journal: Cancers
Published: 2023
PubMed ID: 36900344
Study type:

bioinformatics study

Data availability: GSE151159; GSE92626; GSE66117; GSE111014; GSE119103; GSE66121; GSE11154; GSE95352; GSE161711; GSE109085; GSE113386; GSE70830; GSE100026; GSE66228; GSE66167; GSE216288; GSE192685; GSE198454; GSE197811; GSE196741; GSE165087; GSE176141; GSE130385; GSE162427; GSE136634; GSE123777; GSE111015; E-MTAB-12124; E-MTAB-1176
Code availability: -