circRNA basic information
circBase ID: hsa_circ_0009065
Name: hsa_circ_BFAR
Synonym: -
Host Gene: BFAR
Genomic location(hg19): chr16:14738130-14738466:+
Genomic location(hg38): chr16:14644273-14644609:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005184
MONDO name: pancreatic ductal adenocarcinoma
Disease details: pancreatic ductal adenocarcinoma
Disease DO ID:
3498, 3587
Disease MeSH ID:
D021441
Disease NCIt ID:
C9120
Disease ICD11 ID:
581089833
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

PDAC tissues; normal adjacent tissues (NATs)

Cell lines:

PANC-1; BxPC-3; MIA PaCa-2; CFPAC-1; hTERT-HPNE

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: MET, Akt
Associated microRNA: miR-34b-5p
Biological function: promotes proliferation, migration, invasion, tumorigenesis and metastasis in PDAC
Molecular mechanism: circBFAR functions as a miRNA sponge for miR-34b-5p to upregulate MET, activating downstream Akt phosphorylation and MET/PI3K/Akt signaling
Biological pathway or process:

PI3K/AKT (promotes); proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Sanger Sequencing; RNase R Treatment; Back-Splice Junction PCR / divergent primers PCR; Actinomycin D / DRB Stability Assay; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RNA Pull-Down; Luciferase Reporter Assay; Transfection; Colony Formation Assay; EdU Staining; CCK8; Transwell Assay; Wound Healing Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; H&E Staining; Survival Analysis; Bioinformatics Analysis

Clinical significance:

circBFAR overexpression correlated positively with TNM stage and was an independent prognostic factor for OS and DFS in PDAC

Description:

circBFAR (hsa_circ_0009065), derived from BFAR, is upregulated in PDAC and promotes proliferation, migration/invasion, tumor growth and metastasis. It acts as a cytoplasmic ceRNA that sponges miR-34b-5p to upregulate MET, thereby activating Akt phosphorylation and MET/PI3K/Akt signaling, and high circBFAR predicts worse OS/DFS.

Confidence score:

0.8837

Other information
Title:

Circular RNA circBFAR promotes the progression of pancreatic ductal adenocarcinoma via the miR-34b-5p/MET/Akt axis.

Journal: Molecular cancer
Published: 2020
PubMed ID: 32375768
Study type:

combined biological and clinical study

Data availability: PMID: 27997903; GSE98601
Code availability: -