circRNA basic information
circBase ID: hsa_circ_0068631
Name: hsa_circ_TFRC
Synonym: hsa_circRNA_103557
Host Gene: -
Genomic location(hg19): chr3:195802029-195803993:-
Genomic location(hg38): chr3:196075158-196077122:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0002529
MONDO name: skin squamous cell carcinoma
Disease details: cutaneous squamous cell carcinoma / CSCC
Disease DO ID:
3151
Disease MeSH ID:
-
Disease NCIt ID:
C4819
Disease ICD11 ID:
1448983042
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

CSCC tissues; normal samples; punch biopsies from CSCC

Cell lines:

SCL-1; A431; HaCaT

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: HOXB7
Associated microRNA: miR-139-5p
Biological function: promotes CSCC cell proliferation, invasion/metastasis and EMT; inhibits apoptosis; promotes tumor growth in vivo
Molecular mechanism: ceRNA mechanism: circ_0068631 sponges miR-139-5p to upregulate HOXB7
Biological pathway or process:

proliferation (promotes); invasion (promotes); metastasis (promotes); EMT (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RT-qPCR; RNase R Treatment; Clinical Sample Validation; Bioinformatics Analysis; Transfection; CCK8; EdU Staining; Colony Formation Assay; Annexin V/PI Flow Cytometry; Transwell Assay; Luciferase Reporter Assay; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); RNA-seq

Clinical significance:

potential target for CSCC treatment

Description:

circ_0068631 is overexpressed in CSCC tissues and cell lines and functions as an oncogenic circRNA. It promotes proliferation, invasion/metastasis and EMT while inhibiting apoptosis, at least partly by sponging miR-139-5p to de-repress HOXB7, and it enhances tumor growth in a xenograft model.

Confidence score:

0.786

Other information
Title:

Circ_0068631 sponges miR-139-5p to promote the growth and metastasis of cutaneous squamous cell carcinoma by upregulating HOXB7.

Journal: Skin research and technology : official journal of International Society for Bioengineering and the Skin (ISBS) [and] International Society for Digital Imaging of Skin (ISDIS) [and] International Society for Skin Imaging (ISSI)
Published: 2023
PubMed ID: 36823512
Study type:

combined biological and clinical study

Data availability: GSE74758
Code availability: -