circRNA basic information
circBase ID: -
Name: hsa_circ_CDR1
Synonym: -
Host Gene: CDR1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007885
MONDO name: Legg-Calve-Perthes disease
Disease details: Legg-Calvé-Perthes disease / LCPD
Disease DO ID:
14415
Disease MeSH ID:
D007873
Disease NCIt ID:
C34766
Disease ICD11 ID:
-
Disease OMIM ID:
150600
Species: Human
Species details: Homo sapiens
Tissue specimen:

femoral head cartilage; serum

Cell lines:

TC28; HUVECs

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: PRC2 complex, EZH2, SUZ12, EED
Associated microRNA: miR-214-3p
Biological function: promotes DEX-induced chondrocyte injury (decreased viability and increased apoptosis); inhibits M2 macrophage polarization; inhibits angiogenesis
Molecular mechanism: circCDR1as recruits PRC2 (EZH2/SUZ12/EED) to the miR-214-3p promoter, increasing H3K27me3 and epigenetically repressing miR-214-3p (indirect regulation rather than direct miRNA sponging).
Biological pathway or process:

apoptosis (promotes); proliferation (inhibits); macrophage polarization (inhibits); angiogenesis (inhibits); other pathway/process (other)

Detected method:
Q
Validation methods:

RT-qPCR; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); ChIP / ChIP-seq; RNA Pull-Down; Transfection; CCK8; Annexin V/PI Flow Cytometry; Flow Cytometry(Non-apoptosis/cycle); Tube Formation Assay; Western Blot

Clinical significance:

-

Description:

circCDR1as is up-regulated in LCPD patient cartilage/serum/chondrocytes and negatively correlates with miR-214-3p. It promotes DEX-induced chondrocyte injury and suppresses M2 macrophage polarization and angiogenesis by recruiting PRC2 (EZH2/SUZ12/EED) to epigenetically repress miR-214-3p via H3K27me3.

Confidence score:

0.7334

Other information
Title:

Identification of circRNA CDR1as/miR-214-3p regulatory axis in Legg-Calvé-Perthes disease.

Journal: Orphanet journal of rare diseases
Published: 2024
PubMed ID: 39407304
Study type:

combined biological and clinical study

Data availability: All data generated or analyzed during this study are included in this published article.
Code availability: -