circRNA basic information
circBase ID: hsa_circ_0061406
Name: hsa_circ_TIAM1
Synonym: circTIAM1
Host Gene: TIAM1
Genomic location(hg19): chr21:32554737-32567621:-
Genomic location(hg38): chr21:31182420-31195305:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005075
MONDO name: thyroid gland papillary carcinoma
Disease details: papillary thyroid cancer
Disease DO ID:
3969
Disease MeSH ID:
-
Disease NCIt ID:
C4035
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

PTC tissues; paracarcinoma tissues / adjacent paracancerous tissues

Cell lines:

TPC-1; B-CPAP; KTC-1; IHH-4; K1; Nthy-ori 3-1; HEK-293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: HNRNPA1, Ago2
Associated microRNA: miR-646
Biological function: promotes migration and proliferation; affects apoptosis; promotes tumor growth in vivo
Molecular mechanism: ceRNA mechanism: circTIAM1 sponges miR-646 to derepress HNRNPA1
Biological pathway or process:

proliferation (promotes); migration (promotes); apoptosis (other); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; Clinical Sample Validation; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Transwell Assay; Wound Healing Assay; RNA-seq; Western Blot; IHC (Immunohistochemistry); H&E Staining; In Vivo Animal Model; Survival Analysis

Clinical significance:

high level of circTIAM1 expression was associated with unfavorable prognosis (higher tumor-necrosis-metastasis stage, higher proportion of lymph node metastases, and larger tumor sizes), indicating that circTIAM1 might be a novel prognostic biomarker for PTC

Description:

circTIAM1 (hsa_circ_0061406) is up-regulated in papillary thyroid cancer tissues and cell lines and promotes PTC cell proliferation and migration and supports tumor growth in xenografts. It mainly functions as a ceRNA by sponging miR-646, thereby relieving miR-646-mediated repression of HNRNPA1.

Confidence score:

0.8802

Other information
Title:

CircRNA circTIAM1 promotes papillary thyroid cancer progression through the miR-646/HNRNPA1 signaling pathway.

Journal: Cell death discovery
Published: 2022
PubMed ID: 35022405
Study type:

combined biological and clinical study

Data availability: GSE168449
Code availability: -