circRNA basic information
circBase ID: hsa_circ_0079593
Name: hsa_circ_IGF2BP3
Synonym: circ_0079593
Host Gene: IGF2BP3
Genomic location(hg19): chr7:23381682-23383472:-
Genomic location(hg38): chr7:23342063-23343853:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0021042
MONDO name: glioma
Disease details: glioma
Disease DO ID:
-
Disease MeSH ID:
D005910
Disease NCIt ID:
C3059
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

glioma tissues; normal tissues; tumorous samples; adjacent samples

Cell lines:

U118; U251; U87MG; LN229; NHA

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: miR-182, miR-433
Biological function: circ_0079593 facilitates glioma cell growth, migration and invasion, and inhibits apoptosis; circ_0079593 knockdown suppresses proliferation and metastatic properties and increases apoptosis.
Molecular mechanism: circ_0079593 acts as a competing endogenous RNA by sponging and negatively regulating miR-182 and miR-433; rescue assays showed its biological functions depend on inhibition of miR-182 and miR-433.
Biological pathway or process:

ceRNA regulation (other); proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Transfection; CCK8; Annexin V/PI Flow Cytometry; Wound Healing Assay; Transwell Assay; Luciferase Reporter Assay; Bioinformatics Analysis; Cohort Study; Survival Analysis

Clinical significance:

High circ_0079593 expression was associated with larger tumor size, higher WHO grade, worse survival, and was an independent prognostic indicator for glioma patients.

Description:

circ_0079593 is up-regulated in glioma tissues and cell lines and high expression predicts worse survival, larger tumor size, and higher WHO grade. Functionally, it promotes glioma cell proliferation, migration and invasion while inhibiting apoptosis. Mechanistically, circ_0079593 acts as an oncogenic miRNA sponge that negatively regulates miR-182 and miR-433.

Confidence score:

0.7396

Other information
Title:

Circular RNA circ_0079593 indicates a poor prognosis and facilitates cell growth and invasion by sponging miR-182 and miR-433 in glioma.

Journal: Journal of cellular biochemistry
Published: 2019
PubMed ID: 31148222
Study type:

combined biological and clinical study

Data availability: available from the corresponding author on reasonable request
Code availability: -