circRNA basic information
circBase ID: hsa_circ_0002660
Name: hsa_circ_IFNGR2
Synonym: circIFNGR2
Host Gene: IFNGR2
Genomic location(hg19): chr21:34787194-34805178:+
Genomic location(hg38): chr21:33414887-33432871:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005306
MONDO name: ankylosing spondylitis
Disease details: ankylosing spondylitis / AS
Disease DO ID:
7147
Disease MeSH ID:
D013167
Disease NCIt ID:
C84564
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

peripheral blood mononuclear cells / PBMCs

Cell lines:

THP-1; HEK293T

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
UP
Associated gene: iNOS, TNFalpha, eIF4A3
Associated microRNA: miR-939
Biological function: promotes macrophage proliferation; promotes M1 macrophage polarization and pro-inflammatory cytokine secretion; suppresses M2 polarization
Molecular mechanism: ceRNA sponging of miR-939; regulated by RBP eIF4A3 binding to flanking sequences; activation of NF-kappaB and inhibition of Akt/mTOR in macrophage polarization context
Biological pathway or process:

NF-kappaB (promotes); PI3K/AKT/mTOR (inhibits); proliferation (promotes); macrophage polarization (other); inflammation (promotes); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Transfection; EdU Staining; Flow Cytometry(Non-apoptosis/cycle); Western Blot; ELISA; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); RNA Pull-Down; In Vivo Animal Model; H&E Staining

Clinical significance:

circIFNGR2 expression in PBMCs was positively correlated with ASDASCRP score, BASDAI score, and serum C-reactive protein levels (disease activity).

Description:

circIFNGR2 is up-regulated in PBMCs from ankylosing spondylitis patients and correlates with disease activity. It promotes macrophage proliferation and pro-inflammatory M1 polarization while inhibiting M2 polarization by sponging miR-939, thereby enhancing iNOS/TNFalpha expression and modulating NF-kappaB and Akt/mTOR signaling. Its biogenesis is facilitated by the RBP eIF4A3 binding to flanking sequences.

Confidence score:

0.7951

Other information
Title:

circIFNGR2 regulating ankylosing spondylitis-associated inflammation through macrophage polarization.

Journal: iScience
Published: 2023
PubMed ID: 37520722
Study type:

combined biological and clinical study

Data availability: Supplemental information can be found online at https://doi.org/10.1016/j.isci.2023.107325.
Code availability: -