circRNA basic information
circBase ID: -
Name: hsa_circ_PTGR1
Synonym: circPTGR1
Host Gene: PTGR1
Genomic location(hg19): chr9:114341075-114348445:-
Genomic location(hg38): chr9:111578795-111586165:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0022470
MONDO name: aortic dissection lentiginosis
Disease details: Stanford type A aortic dissection / TAAD
Disease DO ID:
-
Disease MeSH ID:
-
Disease NCIt ID:
-
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ascending aortic tissues; peripheral blood serum / plasma serum

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: HMGA2
Associated microRNA: miR-26b
Biological function: Associated with TAAD pathology and serves as a circulating diagnostic biomarker; implicated in inflammation promotion, ECM degradation and stromal component loss via miRNA interactions.
Molecular mechanism: ceRNA network (circRNA-miRNA-mRNA) prediction; circPTGR1-miR-26b-HMGA2 regulatory chain.
Biological pathway or process:

inflammation (promotes); ceRNA regulation (other); other pathway/process (other)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

High expression in peripheral plasma serum with diagnostic capability to distinguish TAAD from healthy controls (AUC = 0.987 for circPTGR1).

Description:

circPTGR1 is up-regulated in TAAD (aortic tissue and serum) and shows strong diagnostic performance. Mechanistically, it is implicated in a predicted ceRNA axis circPTGR1-miR-26b-HMGA2 and is associated with inflammatory responses and ECM/stromal loss in TAAD.

Confidence score:

0.5047

Other information
Title:

Identification of pathological-related and diagnostic potential circular RNAs in Stanford type A aortic dissection.

Journal: Frontiers in cardiovascular medicine
Published: 2022
PubMed ID: 36712253
Study type:

combined biological and clinical study

Data availability: GSE153434
Code availability: code available by request to the corresponding authors