circRNA basic information
circBase ID: -
Name: hsa_circ_FBXW7
Synonym: circFBXW7
Host Gene: FBXW7
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004963
MONDO name: T-cell acute lymphoblastic leukemia
Disease details: T-cell Acute Lymphoblastic Leukemia / T-ALL
Disease DO ID:
5603
Disease MeSH ID:
-
Disease NCIt ID:
C3183
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

sorted human thymocyte populations; T-ALL samples

Cell lines:

RPMI-8402; ALL-SIL

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: MYC, NOTCH1, FBXW7
Associated microRNA: -
Biological function: Tumor suppressor role in T-ALL; circFBXW7 depletion increases leukemic cell viability and proliferation and is linked with MYC and NOTCH1 hyperactivation; increases Dexamethasone sensitivity.
Molecular mechanism: circFBXW7 depletion activates MYC signaling and NOTCH signaling (increased MYC protein and NOTCH1 cleaved intracellular domain; upregulation of MYC target genes and NOTCH signaling genes).
Biological pathway or process:

proliferation (inhibits); cell cycle (inhibits); Notch (inhibits)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Microarray; Transfection; MTT; EdU Staining; Western Blot; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

Low circFBXW7 levels were associated with a particular gene expression profile in T-ALL patients.

Description:

In pediatric T-ALL, circFBXW7 is depleted/low in a patient subset and acts as a tumor-suppressive circRNA. Its knockdown increases leukemia cell viability and proliferation and is accompanied by activation of MYC targets and NOTCH signaling (including increased MYC and cleaved intracellular NOTCH1 protein levels), and it can increase Dexamethasone sensitivity.

Confidence score:

0.6221

Other information
Title:

CircFBXW7 in patients with T-cell ALL: depletion sustains MYC and NOTCH activation and leukemia cell viability.

Journal: Experimental hematology & oncology
Published: 2023
PubMed ID: 36681829
Study type:

combined biological and clinical study

Data availability: GSE110636
Code availability: -