circRNA basic information
circBase ID: hsa_circ_0072995
Name: hsa_circ_ARHGEF28
Synonym: -
Host Gene: ARHGEF28
Genomic location(hg19): chr5:73069679-73076570:+
Genomic location(hg38): chr5:73773854-73780745:+
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer / BC
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

MCF-7; MDA-MB-231

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: ARHGEF28
Associated microRNA: miR-30c-2-3p
Biological function: Promotes breast cancer cell migration and invasion.
Molecular mechanism: Acts as a miRNA sponge for miR-30c-2-3p and may regulate ARHGEF28 expression.
Biological pathway or process:

migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RT-qPCR; Microarray; FISH / smFISH; Bioinformatics Analysis; Luciferase Reporter Assay; Transfection; Transwell Assay

Clinical significance:

May serve as a novel biomarker for breast cancer.

Description:

hsa_circ_0072995 is up-regulated in MDA-MB-231 breast cancer cells compared with MCF-7 cells. It promotes breast cancer cell migration and invasion, at least partly by acting as a sponge for miR-30c-2-3p, and it may also regulate its host gene ARHGEF28. The study suggests hsa_circ_0072995 may be a novel biomarker related to breast cancer metastasis.

Confidence score:

0.7006

Other information
Title:

Circular RNA hsa_circ_0072995 promotes breast cancer cell migration and invasion through sponge for miR-30c-2-3p.

Journal: Epigenomics
Published: 2018
PubMed ID: 30182731
Study type:

biological research

Data availability: TCGA
Code availability: -