circRNA basic information
circBase ID: hsa_circ_0061276
Name: hsa_circ_NRIP1
Synonym: -
Host Gene: NRIP1
Genomic location(hg19): chr21:16415815-16415895:-
Genomic location(hg38): chr21:15043494-15043574:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma; gastric cancer tissues; para-cancerous tissues

Cell lines:

GES-1; HGC-27; AGS; HEK 293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: NRIP1
Associated microRNA: hsa-miR-7705, hsa-miR-6504-5p, hsa-miR-7974
Biological function: tumor suppressor role; inhibits growth/proliferation and migration; induces G0/G1 arrest
Molecular mechanism: miRNA sponge effect via binding to hsa-miR-7705
Biological pathway or process:

proliferation (inhibits); migration (inhibits); cell cycle (inhibits); ceRNA regulation (other)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis; Luciferase Reporter Assay; Nuclear-Cytoplasmic Fractionation; Actinomycin D / DRB Stability Assay; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Cell Cycle Assay; RT-ddPCR

Clinical significance:

plasma hsa_circ_0061276 has diagnostic value for distinguishing healthy people from early gastric cancer and advanced gastric cancer; potential biomarker

Description:

In gastric cancer, hsa_circ_0061276 is decreased in plasma and gastric cancer cell lines/tissues and shows diagnostic potential by RT-ddPCR with ROC performance for early and advanced disease. Functionally, it acts as a tumor suppressor by inhibiting proliferation and migration and inducing G0/G1 arrest. Mechanistically, it functions mainly in the cytoplasm as a miRNA sponge, with validated binding to hsa-miR-7705.

Confidence score:

0.7941

Other information
Title:

Detecting plasma hsa_circ_0061276 in patients with gastric cancer by reverse transcription-digital polymerase chain reaction.

Journal: Frontiers in oncology
Published: 2022
PubMed ID: 36620570
Study type:

combined biological and clinical study

Data availability: Supplementary Material; https://www.frontiersin.org/articles/10.3389/fonc.2022.1042248/full#supplementary-material
Code availability: -