circRNA basic information
circBase ID: hsa_circ_0000567
Name: hsa_circ_SETD3
Synonym: circSETD3
Host Gene: SETD3
Genomic location(hg19): chr14:99924615-99932150:-
Genomic location(hg38): chr14:99458278-99465813:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues

Cell lines:

SW480; LoVo; NCM460

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: KLF6
Associated microRNA: miR-653
Biological function: circSETD3 overexpression blocks the promoting effects of miR-653 on CRC cell proliferation, invasion and migration and affects apoptosis via sponging miR-653.
Molecular mechanism: ceRNA sponge mechanism: circSETD3 sponges miR-653, thereby regulating KLF6.
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); apoptosis (promotes); ceRNA regulation (other)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; RT-qPCR; Luciferase Reporter Assay; Transfection; MTT; Colony Formation Assay; Transwell Assay

Clinical significance:

circSETD3/miR-653/KLF6 axis may be an effective therapeutic target for CRC patients.

Description:

In CRC cells, circSETD3 (hsa_circ_0000567) is down-regulated and acts as a miRNA sponge for miR-653, thereby relieving miR-653-mediated suppression of KLF6. circSETD3 overexpression counteracts miR-653-driven proliferation, migration and invasion and supports apoptosis, suggesting a tumor-suppressive role via the circSETD3/miR-653/KLF6 axis.

Confidence score:

0.6952

Other information
Title:

Hypoxia-induced miR-653 enhances colorectal cancer progression by targeting circSETD3/KLF6 axis.

Journal: Journal of Cancer
Published: 2023
PubMed ID: 36605481
Study type:

combined biological and clinical study

Data availability: TCGA-COAD; TCGA-READ; GSE147597; GSE50117; GSE156355
Code availability: -