circRNA basic information
circBase ID: hsa_circ_0001250
Name: hsa_circ_GRAMD4
Synonym: -
Host Gene: GRAMD4
Genomic location(hg19): chr22:47022647-47033857:+
Genomic location(hg38): chr22:46626750-46637960:+
Subcellular localization: exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0013860
MONDO name: idiopathic membranous glomerulonephritis
Disease details: idiopathic membranous nephropathy / IMN
Disease DO ID:
-
Disease MeSH ID:
-
Disease NCIt ID:
C123060
Disease ICD11 ID:
-
Disease OMIM ID:
614692
Species: Human
Species details: Homo sapiens
Tissue specimen:

urine exosomes

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: S1PR5, STAT3, TBR1, BMPR1B
Associated microRNA: hsa-miR-639, hsa-miR-4449
Biological function: Potential diagnostic biomarker for IMN; may promote IMN progression and is positively correlated with proteinuria.
Molecular mechanism: Predicted ceRNA mechanism via circRNA-miRNA-mRNA network (binding miRNAs to relieve suppression of target mRNAs).
Biological pathway or process:

ceRNA regulation (other)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Sanger Sequencing; RNase R Treatment; Back-Splice Junction PCR / divergent primers PCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Urinary exosomal hsa_circ_0001250 showed diagnostic potential for IMN (AUC=0.8034 vs HC; AUC=0.7872 vs INS) and higher expression correlated with higher proteinuria.

Description:

Urinary exosomal hsa_circ_0001250 is significantly up-regulated in IMN and correlates with proteinuria. It shows diagnostic value for distinguishing IMN from healthy controls and INS, and is predicted to act via a circRNA-miRNA-mRNA (ceRNA) network involving hsa-miR-639 and hsa-miR-4449 with downstream targets such as S1PR5 and STAT3.

Confidence score:

0.6841

Other information
Title:

Urinary exosomal hsa_circ_0001250 as a novel diagnostic biomarker of idiopathic membranous nephropathy.

Journal: Journal of translational medicine
Published: 2022
PubMed ID: 36536378
Study type:

combined biological and clinical study

Data availability: PRJNA793462
Code availability: -