circRNA basic information
circBase ID: hsa_circ_0079891
Name: -
Synonym: hsa_circRNA_104348
Host Gene: -
Genomic location(hg19): chr7:37250990-37382367:-
Genomic location(hg38): chr7:37211385-37342763:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0005075
MONDO name: thyroid gland papillary carcinoma
Disease details: papillary thyroid carcinoma
Disease DO ID:
 3969
Disease MeSH ID:
 -
Disease NCIt ID:
 C4035
Disease ICD11 ID:
 -
Disease OMIM ID:
 -
Species: Human
Species details: Homo sapiens
Tissue specimen:

thyroid tissue; PTC tumors; contralateral normal thyroid tissue; benign thyroid lesions
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: hsa-miR-519d-5p, hsa-miR-301a-3p, hsa-miR-611, hsa-miR-100-3p, hsa-miR-758-5p
Biological function: -
Molecular mechanism: -
Biological pathway or process:

ceRNA regulation (other)
Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Bioinformatics Analysis; Clinical Sample Validation
Clinical significance:

-
Description:

hsa_circRNA_104348 (hsa_circ_0079891) is significantly down-regulated in papillary thyroid carcinoma tumor tissues based on microarray profiling and RT-qPCR validation. It is predicted to interact with miRNAs including hsa-miR-301a-3p and hsa-miR-100-3p.
Confidence score:

0.5135
Other information
Title:

Microarray profiling of circular RNAs in human papillary thyroid carcinoma.

Journal: PloS one
Published: 2017
PubMed ID: 28288173
Study type:

combined biological and clinical study
Data availability: GSE93522
Code availability: -