circRNA basic information
circBase ID: -
Name: hsa_circ_FOXK2
Synonym: circFOXK2 / circFOKX2
Host Gene: FOXK2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005184
MONDO name: pancreatic ductal adenocarcinoma
Disease details: pancreatic ductal adenocarcinoma / PDAC
Disease DO ID:
3498, 3587
Disease MeSH ID:
D021441
Disease NCIt ID:
C9120
Disease ICD11 ID:
581089833
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

PDAC primary tumor; adjacent non-tumor tissue; FFPE sample

Cell lines:

PANC-1; SW1990; CAPAN-2; CFPAC-1; BxPC-3; HPDE; HEK293

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: ANK1, GDNF, PAX6, YBX1, hnRNPK, NUF2, PDXK
Associated microRNA: miR-942
Biological function: promotes cell growth, clonogenic ability, migration, invasion, tumor growth and liver metastasis; involved in cell cycle progression and apoptosis
Molecular mechanism: circFOXK2 functions as a miR-942 sponge to promote ANK1, GDNF and PAX6 expression, and complexes with YBX1 and hnRNPK to promote oncogenic proteins NUF2 and PDXK
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes); other pathway/process (other)

Detected method:
Q
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; circRNA-seq; Actinomycin D / DRB Stability Assay; RT-qPCR; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; MTT; Colony Formation Assay; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Transwell Assay; Wound Healing Assay; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Western Blot; Bioinformatics Analysis

Clinical significance:

circFOXK2 might be a novel diagnostic marker for PDAC

Description:

circFOXK2 is significantly up-regulated in PDAC cells and primary tumors. It promotes PDAC cell growth, migration, invasion, tumor growth and liver metastasis by sponging miR-942 to increase ANK1, GDNF and PAX6 expression, and by interacting with YBX1/hnRNPK to promote NUF2 and PDXK expression. The study suggests circFOXK2 may serve as a diagnostic marker and therapeutic target for PDAC.

Confidence score:

0.8757

Other information
Title:

CircFOXK2 Promotes Growth and Metastasis of Pancreatic Ductal Adenocarcinoma by Complexing with RNA-Binding Proteins and Sponging MiR-942.

Journal: Cancer research
Published: 2020
PubMed ID: 32217695
Study type:

combined biological and clinical study

Data availability: GSE135731; PXD015048
Code availability: -