circRNA basic information
circBase ID: -
Name: hsa_circ_TDRD3
Synonym: novel_circ_0030384 / novel_ circ_ 0030384
Host Gene: TDRD3
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005393
MONDO name: gout
Disease details: gouty arthritis
Disease DO ID:
13189
Disease MeSH ID:
D006073
Disease NCIt ID:
C34650
Disease ICD11 ID:
395622227
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

whole peripheral blood

Cell lines:

THP-1

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: PSME1, FERMT3, GRK2, OS9, NLRX1
Associated microRNA: miR550a-5p, miR550a-3-5p, miR-550a-5p, miR-550a-3-5p
Biological function: Acts as an upstream ceRNA component; reduced expression decreases miRNA binding, enhancing miRNA-mediated repression of downstream mRNAs linked to inflammatory responses in gouty arthritis.
Molecular mechanism: ceRNA mechanism via binding miR-550a-5p and miR-550a-3-5p to modulate downstream targets (e.g., GRK2, PSME1, FERMT3, OS9).
Biological pathway or process:

ceRNA regulation (other); inflammation (promotes); chemokine signaling (other); NF-kappaB (other); pyroptosis (other); NLRP3 inflammasome (other pathway/process)

Detected method:
S
Validation methods:

circRNA-seq; Bioinformatics Analysis

Clinical significance:

-

Description:

novel_circ_0030384 is a downregulated upstream circRNA in a co-regulated ceRNA network in gouty arthritis. Its reduced abundance is proposed to weaken miRNA sponging (miR-550a-5p/miR-550a-3-5p), thereby enhancing repression of inflammatory-related mRNA targets such as GRK2, PSME1, FERMT3 and OS9 and contributing to inflammation via chemokine-associated processes.

Confidence score:

0.2414

Other information
Title:

Co-regulated ceRNA network mediated by circRNA and lncRNA in patients with gouty arthritis.

Journal: BMC medical genomics
Published: 2024
PubMed ID: 39511617
Study type:

combined biological and clinical study

Data availability: -
Code availability: -