circRNA basic information
circBase ID: hsa_circ_0097271
Name: hsa_circ_ATP2A2
Synonym: circ_0097271
Host Gene: ATP2A2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma / OS
Disease DO ID:
3347
Disease MeSH ID:
D012516
Disease NCIt ID:
C9145
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

OS tumor samples; matched noncancer normal control tissues; tumor tissues

Cell lines:

Saos-2; SW1353; SOSP-9607; HOS; hFOB1.19

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: MCAM
Associated microRNA: miR-640
Biological function: promotes OS cell growth and migration; promotes tumor growth in vivo
Molecular mechanism: Acts as a miRNA sponge/ceRNA to bind miR-640 and thereby releases MCAM from miR-640-mediated suppression.
Biological pathway or process:

proliferation (promotes); migration (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; ROC Analysis; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; Colony Formation Assay; Transwell Assay; In Vivo Animal Model

Clinical significance:

Diagnostic potentials of levels of circ_0097271 for OS were evaluated by ROC curve analysis... Area under the curve was 0.9744

Description:

circ_0097271 is up-regulated in osteosarcoma tissues and cell lines and mainly localized in the cytoplasm. Its knockdown inhibits proliferation and migration in vitro and suppresses xenograft tumor growth in vivo, at least partly by sponging miR-640 to de-repress the downstream target MCAM.

Confidence score:

0.8025

Other information
Title:

Hsa_circ_0097271 Knockdown Attenuates Osteosarcoma Progression via Regulating miR-640/MCAM Pathway.

Journal: Disease markers
Published: 2022
PubMed ID: 36340580
Study type:

combined biological and clinical study

Data availability: All data generated or analyzed during this study are included in this article.
Code availability: -