circRNA basic information
circBase ID: hsa_circ_0004689
Name: hsa_circ_SWT1
Synonym: circSWT1
Host Gene: SWT1
Genomic location(hg19): chr1:185183638-185200840:+
Genomic location(hg38): chr1:185214506-185231708:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer / NSCLC
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC tissues; paired normal tissues

Cell lines:

HBE; A549; NCI-H460; PC-9; H1703; NCI-H1299; HEK-293 T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SNAIL, AGO2
Associated microRNA: miR-370-3p
Biological function: Promotes NSCLC progression by promoting viability, invasion, migration, metastasis, and inducing EMT.
Molecular mechanism: circSWT1 functions as a ceRNA sponge for miR-370-3p, relieving repression of SNAIL and thereby inducing EMT and NSCLC progression.
Biological pathway or process:

EMT (promotes); migration (promotes); invasion (promotes); metastasis (promotes); proliferation (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; FISH / smFISH; Luciferase Reporter Assay; RNA Pull-Down; circRIP; RIP (RNA Immunoprecipitation); Transfection; CCK8; Colony Formation Assay; Transwell Assay; Wound Healing Assay; Western Blot; IF (Immunofluorescence); IHC (Immunohistochemistry); In Vivo Animal Model; H&E Staining; Clinical Sample Validation; Cohort Study; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circSWT1 expression predicts poor prognosis (worse overall survival and higher postoperative recurrence) and is an independent predictor of prognosis in NSCLC.

Description:

In NSCLC, circSWT1 (hsa_circ_0004689) is upregulated and promotes tumor growth, invasion, migration, metastasis and EMT. It acts as a miR-370-3p sponge to derepress SNAIL, and SNAIL knockout reverses circSWT1-driven phenotypes. High circSWT1 expression is associated with poor prognosis.

Confidence score:

0.8815

Other information
Title:

Circular RNA hsa_circ_0004689 (circSWT1) promotes NSCLC progression via the miR-370-3p/SNAIL axis by inducing cell epithelial-mesenchymal transition (EMT).

Journal: Cancer medicine
Published: 2023
PubMed ID: 36530171
Study type:

combined biological and clinical study

Data availability: This published article and its additional information files contain all data produced or analyzed during this investigation.
Code availability: -