circRNA basic information
circBase ID: -
Name: hsa_circ_NFIX
Synonym: hsa_circ_005660 / circNFIX
Host Gene: NFIX
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005178
MONDO name: osteoarthritis
Disease details: Osteoarthritis / OA
Disease DO ID:
8398
Disease MeSH ID:
D010003
Disease NCIt ID:
C3293
Disease ICD11 ID:
558562409
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

cartilage tissues

Cell lines:

SW1353; HEK293T

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
DN
Associated gene: KDM6A, SOX9, Ago2
Associated microRNA: miR-758-3p
Biological function: promote hADSC chondrogenesis; maintain cartilage homeostasis; protect against chondrocyte degradation; alleviate OA progression
Molecular mechanism: circNFIX acts as a miRNA sponge for miR-758-3p to regulate KDM6A, affecting SOX9 methylation and ECM metabolism
Biological pathway or process:

ceRNA regulation (promotes); proliferation (not specified); apoptosis (not specified); migration (not specified); invasion (not specified); EMT (not specified)

Detected method:
Q
H
M
Validation methods:

Microarray; RT-qPCR; FISH / smFISH; ISH (In Situ Hybridization); Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; RNA Pull-Down; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; Western Blot; IF (Immunofluorescence); IHC (Immunohistochemistry); In Vivo Animal Model; H&E Staining

Clinical significance:

-

Description:

circNFIX is decreased in OA cartilage and supports cartilage homeostasis by promoting chondrogenesis and reducing ECM catabolism. It mainly functions as a cytoplasmic ceRNA, sponging miR-758-3p to relieve repression of KDM6A, which affects SOX9 methylation and chondrocyte phenotype. Intra-articular overexpression of circNFIX alleviates OA progression in the DMM mouse model.

Confidence score:

0.8398

Other information
Title:

CircNFIX regulates chondrogenesis and cartilage homeostasis by targeting the miR758-3p/KDM6A axis.

Journal: Cell proliferation
Published: 2022
PubMed ID: 35791460
Study type:

combined biological and clinical study

Data availability: PRJNA755468; https://www.ncbi.nlm.nih.gov/search/all/?term=PRJNA755468
Code availability: -