circRNA basic information
circBase ID: -
Name: mmu_circ_Cdr1
Synonym: circ-Cdr1as / circular RNA Cdr1as
Host Gene: Cdr1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005046
MONDO name: immune system disorder
Disease details: inflammation
Disease DO ID:
2914
Disease MeSH ID:
D007154
Disease NCIt ID:
C3507
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Mouse
Species details: Mus musculus
Tissue specimen:

bone marrow derived macrophages / BMDM

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DS
Associated gene: -
Associated microRNA: miR-7a/b-5p, miR-450b-3p, miR-7685-3p, miR-7074-5p, miR-7-5p
Biological function: promotes phenotypic switching/polarization toward an anti-inflammatory macrophage phenotype; increases anti-inflammatory markers (e.g., CD206) and decreases pro-inflammatory marker CD86 when overexpressed; opposite effects upon knockdown
Molecular mechanism: predicted ceRNA/miRNA sponge interactions (circRNA-miRNA-mRNA network), including miR-7 family
Biological pathway or process:

immune regulation (promotes); ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; divergent primers PCR; RNase R Treatment; Sanger Sequencing; Transfection; Flow Cytometry(Non-apoptosis/cycle); Bioinformatics Analysis

Clinical significance:

-

Description:

In murine bone marrow-derived macrophages, circ-Cdr1as is decreased in pro-inflammatory (M1-like) polarization and increased in anti-inflammatory (M2-like) polarization. Overexpression promotes anti-inflammatory marker expression and CD206+ cells, while knockdown shifts cells toward a pro-inflammatory phenotype (increased CD86+), and bioinformatic predictions suggest circ-Cdr1as may act through a circRNA-miRNA-mRNA network including miR-7 family.

Confidence score:

0.6475

Other information
Title:

Role of circular RNA cdr1as in modulation of macrophage phenotype.

Journal: Life sciences
Published: 2022
PubMed ID: 36181865
Study type:

biological research

Data availability: https://doi.org/10.1016/j.lfs.2022.121003; available upon request from the corresponding author
Code availability: -