circRNA basic information
circBase ID: hsa_circ_0000854
Name: hsa_circ_ZCCHC2
Synonym: -
Host Gene: ZCCHC2
Genomic location(hg19): chr18:60206913-60217693:+
Genomic location(hg38): chr18:62539680-62550460:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
 684, 686
Disease MeSH ID:
 D006528
Disease NCIt ID:
 C3099
Disease ICD11 ID:
 1294035808
Disease OMIM ID:
 114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissue; adjacent normal tissue
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: -
Biological function: -
Molecular mechanism: -
Biological pathway or process:

not specified
Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; Clinical Sample Validation; divergent primers PCR; Sanger Sequencing
Clinical significance:

-
Description:

hsa_circ_0000854 was identified as significantly up-regulated in LIHC based on GEO analysis and was experimentally verified by RT-qPCR/Sanger sequencing in clinical specimens, but no specific downstream mechanism or clinical impact was reported for this circRNA.
Confidence score:

0.585
Other information
Title:

Identification of a Novel Survival-Related circRNA-miRNA-mRNA Regulatory Network Related to Immune Infiltration in Liver Hepatocellular Carcinoma.

Journal: Frontiers in genetics
Published: 2022
PubMed ID: 35309118
Study type:

combined biological and clinical study
Data availability: GSE164803; https://www.frontiersin.org/articles/10.3389/fgene.2022.800537/full#supplementary-material
Code availability: -