circRNA basic information
circBase ID: hsa_circ_0052602
Name: hsa_circ_ODC1
Synonym: circODC1
Host Gene: ODC1
Genomic location(hg19): chr2:10581634-10585390:-
Genomic location(hg38): chr2:10441508-10445264:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005131
MONDO name: cervical carcinoma
Disease details: HPV-positive cervical cancer
Disease DO ID:
2893
Disease MeSH ID:
-
Disease NCIt ID:
C9039
Disease ICD11 ID:
1743710977
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

CaSki; SiHa; C4-I; C33A; Ect1/E6E7; HEK293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: ODC1, FOXA1, Ago2
Associated microRNA: miR-607
Biological function: CircODC1 promotes HPV-positive cervical cancer cell proliferation, migration and invasion, and inhibits apoptosis.
Molecular mechanism: FOXA1 transcriptionally activates circODC1; circODC1 acts as a ceRNA that sponges miR-607 to up-regulate ODC1 expression.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; RIP (RNA Immunoprecipitation); RNA Pull-Down; ChIP / ChIP-seq; Luciferase Reporter Assay; Transfection; Colony Formation Assay; EdU Staining; Annexin V/PI Flow Cytometry; Transwell Assay; Wound Healing Assay; Western Blot; Bioinformatics Analysis

Clinical significance:

These findings offer new insights into therapeutic strategies for HPV-positive CC patients.

Description:

CircODC1 (hsa_circ_0052602) is up-regulated in HPV-positive cervical cancer cell lines and functions as an oncogenic circRNA. FOXA1 activates circODC1 transcription, and circODC1 promotes malignant cell growth by sponging miR-607 to relieve repression of its host gene ODC1.

Confidence score:

0.8164

Other information
Title:

FOXA1 co-activates circODC1 and ODC1 in HPV-positive cervical cancer cell growth.

Journal: Systems biology in reproductive medicine
Published: 2024
PubMed ID: 38743820
Study type:

biological research

Data availability: Contact the corresponding author.
Code availability: -