circRNA basic information
circBase ID: hsa_circ_0000144
Name: hsa_circ_SLAMF6
Synonym: circ_0000144
Host Gene: SLAMF6
Genomic location(hg19): chr1:160472466-160472794:+
Genomic location(hg38): chr1:160502676-160503004:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; paired adjacent normal tissues

Cell lines:

GES-1; AGS; NCI-N87; SNU-5; KATO III

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: ANLN
Associated microRNA: miR-217
Biological function: Promotes gastric cancer cell proliferation, migration, invasion and EMT; its knockdown suppresses these malignant phenotypes.
Molecular mechanism: Acts as a miRNA sponge for miR-217, relieving miR-217-mediated repression of ANLN; affects EMT marker proteins (E-cadherin, N-cadherin, Vimentin).
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); EMT (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Transfection; Colony Formation Assay; Wound Healing Assay; Transwell Assay; Bioinformatics Analysis; Luciferase Reporter Assay; RNA Pull-Down; Western Blot; Clinical Sample Validation

Clinical significance:

Potential biomarker and therapeutic target for treatment of GC.

Description:

circ_0000144 is up-regulated in gastric cancer tissues and cell lines and acts as an oncogenic circRNA. It promotes proliferation, migration, invasion and EMT by sponging miR-217, thereby relieving suppression of the downstream target ANLN.

Confidence score:

0.7032

Other information
Title:

Knockdown of Circ_0000144 Suppresses Cell Proliferation, Migration and Invasion in Gastric Cancer Via Sponging MiR-217.

Journal: Journal of microbiology and biotechnology
Published: 2021
PubMed ID: 33958507
Study type:

combined biological and clinical study

Data availability: TCGA-STAD
Code availability: -