circRNA basic information
circBase ID: hsa_circ_0001724
Name: hsa_circ_CDK6
Synonym: hsa_circ_000984
Host Gene: CDK6
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tumors; adjacent normal tissues

Cell lines:

SW480; SW620; HT29; CCD-18Co; InEpC; 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: CDK6
Associated microRNA: miR-106b
Biological function: Promotes CRC cell proliferation, migration, invasion, cell cycle progression, and tumor growth/tumorigenesis in vivo.
Molecular mechanism: Acts as a ceRNA/miRNA sponge for miR-106b to upregulate CDK6 expression.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); invasion (promotes); cell cycle (promotes)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RT-qPCR; Clinical Sample Validation; Transfection; Luciferase Reporter Assay; Western Blot; CCK8; Colony Formation Assay; Cell Cycle Assay; Transwell Assay; In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

High expression level of hsa_circ_000984 was significantly associated with advanced TNM stage (III+IV) in CRC.

Description:

hsa_circ_000984 is up-regulated in colorectal cancer tissues and cell lines and is associated with advanced TNM stage. It promotes CRC proliferation, cell-cycle progression, migration/invasion and xenograft tumor growth by sponging miR-106b and increasing CDK6 expression via a ceRNA mechanism.

Confidence score:

0.7181

Other information
Title:

Circular RNA hsa_circ_000984 promotes colon cancer growth and metastasis by sponging miR-106b.

Journal: Oncotarget
Published: 2017
PubMed ID: 29207676
Study type:

combined biological and clinical study

Data availability: -
Code availability: -