circRNA basic information
circBase ID: -
Name: hsa_circ_PRMT5
Synonym: -
Host Gene: PRMT5
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissue; adjacent non-tumour tissue

Cell lines:

HCT-116; LoVo; SW-480; SW-620; HT-29; FHC

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: E2F3, CyclinD1, CDK2, Ago2
Associated microRNA: miR-377
Biological function: promotes colorectal cancer cell proliferation and tumorigenicity; increases cell cycle-associated proteins CyclinD1 and CDK2
Molecular mechanism: Acts as a miRNA sponge for miR-377 to relieve repression of E2F3, thereby promoting proliferation and cell-cycle protein expression (CyclinD1, CDK2).
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); ceRNA regulation (promotes)

Detected method:
Q
H
Validation methods:

RT-qPCR; FISH / smFISH; Clinical Sample Validation; Survival Analysis; Transfection; CCK8; Colony Formation Assay; In Vivo Animal Model; Western Blot; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay

Clinical significance:

Patients with higher circPRTM5 levels showed a poorer overall survival; expression correlated with age, tumour size, depth of invasion and AJCC stage.

Description:

CircPRMT5 is up-regulated in colorectal cancer tissues and cell lines and is mainly localized in the cytoplasm. It promotes CRC proliferation and tumor growth by sponging miR-377 to increase E2F3 expression, thereby elevating cell-cycle proteins (CyclinD1 and CDK2), and high CircPRMT5 levels are associated with poorer overall survival.

Confidence score:

0.7778

Other information
Title:

CircPRMT5 circular RNA promotes proliferation of colorectal cancer through sponging miR-377 to induce E2F3 expression.

Journal: Journal of cellular and molecular medicine
Published: 2020
PubMed ID: 32020730
Study type:

combined biological and clinical study

Data availability: The data that support the findings of this study are available from the corresponding author upon reasonable request.
Code availability: -