circRNA basic information
circBase ID: -
Name: hsa_circ_RBM33
Synonym: circRBM33
Host Gene: RBM33
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005350
MONDO name: abdominal aortic aneurysm
Disease details: abdominal aortic aneurysm
Disease DO ID:
7693
Disease MeSH ID:
D017544
Disease NCIt ID:
-
Disease ICD11 ID:
1154633768
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

AAA tissues; normal abdominal aortic tissues

Cell lines:

293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: EPHB2, MMP-2, TIMP-1
Associated microRNA: miR-4268
Biological function: Promotes extracellular matrix degradation in AAA by increasing MMP-2 and reducing TIMP-1 in VSMCs.
Molecular mechanism: Acts as a miR-4268 sponge to upregulate EPHB2, thereby promoting ECM degradation (increased MMP-2 and decreased TIMP-1).
Biological pathway or process:

ceRNA regulation (promotes); other pathway/process (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; Luciferase Reporter Assay; Bioinformatics Analysis; Transfection; Western Blot; Clinical Sample Validation

Clinical significance:

circRBM33 may be a potential diagnostic and therapeutic target for AAA.

Description:

circRBM33 is up-regulated in abdominal aortic aneurysm tissues and Ang II-induced VSMCs. Functionally, circRBM33 overexpression promotes ECM degradation by increasing MMP-2 and decreasing TIMP-1, mechanistically via sponging miR-4268 to upregulate EPHB2 (circRBM33/miR-4268/EPHB2 axis).

Confidence score:

0.7519

Other information
Title:

Circular RNA RBM33 contributes to extracellular matrix degradation via miR-4268/EPHB2 axis in abdominal aortic aneurysm.

Journal: PeerJ
Published: 2021
PubMed ID: 34820156
Study type:

combined biological and clinical study

Data availability: figshare: Zhou, Weimin (2021): Data Files. figshare. Dataset.; Supplemental Files
Code availability: -