circRNA basic information
circBase ID: -
Name: hsa_circ_FN1
Synonym: circFN1 / circular RNA FN1
Host Gene: FN1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: unclear
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005045
MONDO name: hypertrophic cardiomyopathy
Disease details: Hypertrophic cardiomyopathy / HCM
Disease DO ID:
11984
Disease MeSH ID:
D002312
Disease NCIt ID:
C34449
Disease ICD11 ID:
1830681485
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

peripheral blood

Cell lines:

H9c2; HEK293

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: ACTB, AGO2
Associated microRNA: miR-206
Biological function: Acts as a ceRNA (miRNA sponge) for miR-206 to increase ACTB expression, contributing to HCM occurrence/progression.
Molecular mechanism: ceRNA regulation: circFN1 competitively binds miR-206 (AGO2-associated) thereby relieving repression of ACTB.
Biological pathway or process:

ceRNA regulation (promotes); other pathway/process (other)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); FISH / smFISH; Bioinformatics Analysis; Transfection

Clinical significance:

Potential blood circulation marker for HCM.

Description:

In HCM peripheral blood, circFN1 is down-regulated. circFN1 acts as a ceRNA by binding miR-206 (AGO2-associated), thereby relieving miR-206-mediated repression of ACTB and contributing to HCM occurrence/progression.

Confidence score:

0.6521

Other information
Title:

lncRNA ADAMTS9-AS1/circFN1 Competitively Binds to miR-206 to Elevate the Expression of ACTB, Thus Inducing Hypertrophic Cardiomyopathy.

Journal: Oxidative medicine and cellular longevity
Published: 2022
PubMed ID: 35401927
Study type:

combined biological and clinical study

Data availability: GSE36961; GSE148602; GSE68316
Code availability: -