circRNA basic information
circBase ID: hsa_circ_0002360
Name: hsa_circ_RUNX1
Synonym: circ0002360 / circRNA_0002360
Host Gene: RUNX1
Genomic location(hg19): chr21:36206706-36231875:-
Genomic location(hg38): chr21:34834409-34859578:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

NCI-N87; SNU-484; MKN-74; SGC-7901; AGS; GES-1; HEK293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: PDLIM4, Ago2
Associated microRNA: miR-629-3p
Biological function: promotes proliferation and invasion; inhibits oxidative stress (reduces ROS; increases SOD, CAT, GSH-Px)
Molecular mechanism: acts as a miRNA sponge for miR-629-3p to upregulate PDLIM4 expression
Biological pathway or process:

proliferation (promotes); invasion (promotes); oxidative stress (inhibits); ceRNA regulation (other)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; Colony Formation Assay; Transwell Assay; ELISA; Western Blot

Clinical significance:

may be a useful marker for predicting GC prognosis and an anti-GC treatment target

Description:

hsa_circ_0002360 (circ0002360) is up-regulated in gastric cancer cell lines and mainly enriched in the cytoplasm. It promotes proliferation and invasion and suppresses oxidative stress by sponging miR-629-3p, thereby increasing PDLIM4 expression.

Confidence score:

0.7437

Other information
Title:

Circular RNA hsa_circ_0002360 Promotes Proliferation and Invasion and Inhibits Oxidative Stress in Gastric Cancer by Sponging miR-629-3p and Regulating the PDLIM4 Expression.

Journal: Oxidative medicine and cellular longevity
Published: 2022
PubMed ID: 35982735
Study type:

biological research

Data availability: GSE103236; GSE79973; GSE33429; GSE22804; GSE84437; TCGA-STAD
Code availability: -