circRNA basic information
circBase ID: hsa_circ_0006988
Name: hsa_circ_LDLRAD3
Synonym: circ-LDLRAD3
Host Gene: LDLRAD3
Genomic location(hg19): chr11:36248634-36248980:+
Genomic location(hg38): chr11:36227084-36227430:+
Subcellular localization: exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissues; paired normal tissues

Cell lines:

NCI-N87; HGC-27; AGS; GES-1; HGC-27/CDDP; AGS/CDDP; HGC-27/DDP; AGS/DDP

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SOX5
Associated microRNA: miR-588
Biological function: promotes cisplatin chemoresistance and malignant behaviors (proliferation/survival/invasion) in DDP-resistant gastric cancer; its knockdown increases DDP sensitivity, promotes apoptosis, and suppresses tumor growth
Molecular mechanism: ceRNA mechanism: circ-LDLRAD3 sponges miR-588 to relieve repression of SOX5, thereby promoting DDP resistance and malignant phenotypes; circ-LDLRAD3 can be transferred by exosomes
Biological pathway or process:

chemoresistance (promotes); proliferation (promotes); invasion (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Clinical Sample Validation; Bioinformatics Analysis; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; EdU Staining; Annexin V/PI Flow Cytometry; Transwell Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model

Clinical significance:

circ-LDLRAD3 may serve as an exosomal biomarker to predict DDP resistance in GC; circ-LDLRAD3 high expression is associated with aggressive clinicopathologic features (e.g., TNM grade, lymph node metastasis, tumor size, histologic grade)

Description:

circ-LDLRAD3 (hsa_circ_0006988) is up-regulated in cisplatin-resistant gastric cancer tissues/cells and promotes cisplatin chemoresistance, proliferation/survival and invasion. Mechanistically, it acts as a sponge for miR-588 to increase SOX5 expression, and it is enriched in exosomes from DDP-resistant GC cells.

Confidence score:

0.7662

Other information
Title:

circ-LDLRAD3 Knockdown Reduces Cisplatin Chemoresistance and Inhibits the Development of Gastric Cancer with Cisplatin Resistance through miR-588 Enrichment-Mediated SOX5 Inhibition.

Journal: Gut and liver
Published: 2023
PubMed ID: 35975639
Study type:

combined biological and clinical study

Data availability: GSE93541
Code availability: -