circRNA basic information
circBase ID: -
Name: -
Synonym: hsa_circRNA 103489 / circRNA_103489
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; paired adjacent non-tumorous (NT) tissues

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: predicted mRNAs
Associated microRNA: miR-654-3p, miR-511-5p, miR-632, miR-643, miR-889-5p
Biological function: Aberrantly up-regulated in HBV-related HCC tissues; may represent a potential novel biomarker for HCC early diagnosis and prognosis.
Molecular mechanism: Predicted circRNA/miRNA interactions and downstream miRNA/mRNA network; biological effects may be achieved by binding miRNAs.
Biological pathway or process:

ceRNA regulation (other); PI3K/AKT (other); other pathway/process (other)

Detected method:
Q
M
Validation methods:

RNase R Treatment; RT-qPCR; Microarray; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

may represent potential novel biomarkers for HCC early diagnosis and prognosis

Description:

hsa_circRNA 103489/circRNA_103489 was significantly up-regulated in HBV-related HCC tissues and was validated by qRT-PCR. The study predicted circRNA_103489 interactions with five miRNAs and related target mRNAs, implying a possible miRNA-mediated regulatory role and potential biomarker relevance.

Confidence score:

0.5135

Other information
Title:

Screening and bioinformatics analysis of circular RNA expression profiles in hepatitis B-related hepatocellular carcinoma.

Journal: Cancer biomarkers : section A of Disease markers
Published: 2018
PubMed ID: 29914004
Study type:

combined biological and clinical study

Data availability: -
Code availability: -