circRNA basic information
circBase ID: -
Name: hsa_circ_EPSTI1
Synonym: hsa_circRNA_000479
Host Gene: EPSTI1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004975
MONDO name: Alzheimer disease
Disease details: Alzheimer's disease / AD
Disease DO ID:
10652
Disease MeSH ID:
D000544
Disease NCIt ID:
C2866
Disease ICD11 ID:
1611724421
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

blood

Cell lines:

HEK293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: EPSTI1, ZNF704, POU2F2
Associated microRNA: hsa-miR-942-5p, hsa-miR-4753-3p, hsa-miR-6739-3p
Biological function: May function as a miRNA sponge (ceRNA) to regulate EPSTI1 expression in the AD continuum.
Molecular mechanism: ceRNA/miRNA sponging: hsa_circRNA_000479 binds miRNAs (validated for hsa-miR-942-5p, hsa-miR-4753-3p, hsa-miR-6739-3p) to regulate target gene expression (EPSTI1).
Biological pathway or process:

ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Luciferase Reporter Assay; Transfection; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

May be a non-invasive biomarker for early stage AD patient screening tests.

Description:

hsa_circRNA_000479 is up-regulated in blood across AD continuum stages and is suggested as an early, non-invasive screening biomarker. It likely functions via a ceRNA mechanism, sponging miRNAs (validated for hsa-miR-942-5p, hsa-miR-4753-3p, and hsa-miR-6739-3p) to regulate EPSTI1 expression.

Confidence score:

0.5922

Other information
Title:

Screening of Human Circular RNAs as Biomarkers for Early Onset Detection of Alzheimer's Disease.

Journal: Frontiers in neuroscience
Published: 2022
PubMed ID: 35864990
Study type:

combined biological and clinical study

Data availability: Supplementary File 1; Supplementary File 2; https://www.frontiersin.org/articles/10.3389/fnins.2022.878287/full#supplementary-material
Code availability: -