circRNA basic information
circBase ID: hsa_circ_0001725
Name: hsa_circ_LMTK2
Synonym: -
Host Gene: LMTK2
Genomic location(hg19): chr7:97820039-97823884:+
Genomic location(hg38): chr7:98190727-98194572:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

gastric carcinoma tissue specimens; paired normal tissues; adjacent normal tissues; carcinoma specimens; para-carcinoma tissue

Cell lines:

MGC-803; BGC-823; GEL-1; SGC-7901; AGS; MKN45

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: Bax, Bcl-2, cleaved Caspase 3
Associated microRNA: -
Biological function: inhibits proliferation and mobility (migration/invasion) and promotes apoptosis in gastric cancer cells
Molecular mechanism: Overexpression of circLMTK2 increases Bax and cleaved Caspase 3 and suppresses Bcl-2, promoting apoptosis and inhibiting malignant phenotypes
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); apoptosis (promotes)

Detected method:
Q
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; Actinomycin D / DRB Stability Assay; RT-qPCR; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Survival Analysis; Transfection; CCK8; Transwell Assay; Western Blot; RNA-seq

Clinical significance:

Lower circLMTK2 expression is associated with decreased overall survival, and high circLMTK2 expression is an independent factor for OS in GC

Description:

circLMTK2 (hsa_circ_0001725), derived from LMTK2, is down-regulated in gastric cancer tissues and several GC cell lines. Functionally, circLMTK2 overexpression suppresses viability and migration/invasion and promotes apoptosis (with increased Bax/cleaved Caspase 3 and decreased Bcl-2). Clinically, higher circLMTK2 expression correlates with longer overall survival and is an independent prognostic factor.

Confidence score:

0.785

Other information
Title:

CircLMTK2 acts as a novel tumor suppressor in gastric cancer.

Journal: Bioscience reports
Published: 2019
PubMed ID: 30988068
Study type:

combined biological and clinical study

Data availability: -
Code availability: -