circRNA basic information
circBase ID: hsa_circ_0086913
Name: hsa_circ_TLN1
Synonym: -
Host Gene: TLN1
Genomic location(hg19): chr9:35705547-35714078:-
Genomic location(hg38): chr9:35705550-35714081:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0019091
MONDO name: bronchopulmonary dysplasia
Disease details: Bronchopulmonary dysplasia / BPD
Disease DO ID:
11650
Disease MeSH ID:
D001997
Disease NCIt ID:
C90599
Disease ICD11 ID:
1462855296
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

umbilical cord blood serum

Cell lines:

HUVECs

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: TM4SF1
Associated microRNA: hsa-miR-330-5p, hsa-miR-4656, hsa-miR-6829-3p, hsa-miR-103a-3p, hsa-miR-107, hsa-miR-4688, hsa-miR-7161-3p, hsa-miR-3192-5p, hsa-miR-3620-5p, hsa-miR-1182, hsa-miR-6783-3p
Biological function: might contribute to the development of BPD
Molecular mechanism: ceRNA mechanism via hsa-miR-103a-3p to regulate TM4SF1
Biological pathway or process:

ceRNA regulation (other); PI3K/AKT (other); angiogenesis (other); proliferation (other); migration (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

-

Description:

Exosomal hsa_circ_0086913 was upregulated in umbilical cord blood exosomes from preterm infants with BPD (validated by qRT-PCR). Bioinformatic ceRNA prediction suggested a potential hsa_circ_0086913/hsa-miR-103a-3p/TM4SF1 axis that may contribute to BPD development.

Confidence score:

0.4032

Other information
Title:

CircRNA, lncRNA, and mRNA profiles of umbilical cord blood exosomes from preterm newborns showing bronchopulmonary dysplasia.

Journal: European journal of pediatrics
Published: 2022
PubMed ID: 35790551
Study type:

combined biological and clinical study

Data availability: GSE190215
Code availability: -