circRNA basic information
circBase ID: hsa_circ_0045431
Name: hsa_circ_BPTF
Synonym: circBPTF
Host Gene: BPTF
Genomic location(hg19): chr17:65850055-65850878:+
Genomic location(hg38): chr17:67853939-67854762:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; adjacent non-tumor counterparts; lung tissues; liver tissues

Cell lines:

Hep3B; HepG2; HEK-293T; Huh1; HCCLM3; Bel-7402; HCC-ZJ; SMMC7721

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: RNA polymerase III subunit G (POLR3G), zinc finger and BTB domain containing 41 (ZBTB41), HNRNPC, HNRNPU, AGO2
Associated microRNA: miR-548m
Biological function: promotes HCC cell migration and invasion in vitro and promotes HCC lung metastasis in vivo; no significant effect on HCC cell proliferation was observed
Molecular mechanism: circBPTF functions as a miR-548m sponge to upregulate POLR3G and ZBTB41; its biosynthesis is promoted by HNRNPC and HNRNPU; elemene suppresses HNRNPC and the circBPTF/miR-548m/POLR3G network
Biological pathway or process:

migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes); proliferation (other); other pathway/process (other)

Detected method:
Q
H
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; circRNA-seq; Actinomycin D / DRB Stability Assay; RT-qPCR; RNA-seq; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Wound Healing Assay; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Western Blot; Bioinformatics Analysis

Clinical significance:

circBPTF is highly expressed in HCC tissues and may serve as a therapeutic target for HCC metastasis and as an important target of elemene

Description:

circBPTF is an up-regulated human circRNA in HCC that promotes migration, invasion, and lung metastasis. It acts as a miR-548m sponge to increase POLR3G and ZBTB41 expression, while its biogenesis is regulated by HNRNPC and HNRNPU. Elemene inhibits HCC metastasis at least partly by downregulating HNRNPC, suppressing circBPTF, and reducing the circBPTF/miR-548m/POLR3G network.

Confidence score:

0.8834

Other information
Title:

The anti-metastatic effect of elemene in human hepatocellular carcinoma is potentially mediated by inhibiting a novel driver-circBPTF.

Journal: Phytomedicine : international journal of phytotherapy and phytopharmacology
Published: 2025
PubMed ID: 40347926
Study type:

combined biological and clinical study

Data availability: PRJNA1209208; PRJNA1209431; GSE26323; LIHC-TCGA; Supplementary material at doi:10.1016/j.phymed.2025.156808
Code availability: -