circRNA basic information
circBase ID: hsa_circ_0002082
Name: hsa_circ_MALAT1
Synonym: -
Host Gene: MALAT1
Genomic location(hg19): chr11:65271199-65272066:+
Genomic location(hg38): chr11:65503728-65504595:+
Subcellular localization: nucleus
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0018177
MONDO name: glioblastoma
Disease details: glioblastoma
Disease DO ID:
3068
Disease MeSH ID:
D005909
Disease NCIt ID:
C3058
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

glioblastoma tissue; adjacent matched brain tissue; normal brains

Cell lines:

GSCs; NPCs

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: DICER, RBM3
Associated microRNA: -
Biological function: Promotes glioblastoma stem-like cell tumorigenicity by retaining DICER in the nucleus and suppressing mature microRNAome; circ2082 knockdown mitigates tumorigenicity and improves survival in mouse xenografts.
Molecular mechanism: Forms a nuclear complex with DICER and RBM3; RBM3 binds directly to circ2082, enabling DICER nuclear retention and impaired microRNA maturation; circ2082 knockdown restores cytosolic DICER and derepresses mature microRNAome.
Biological pathway or process:

ceRNA regulation (other); other pathway/process (other)

Detected method:
Q
H
M
Validation methods:

RT-qPCR; Microarray; RNase R Treatment; Sanger Sequencing; RIP (RNA Immunoprecipitation); RNA Pull-Down; Western Blot; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Transfection; Colony Formation Assay; In Vivo Animal Model; Survival Analysis; Bioinformatics Analysis

Clinical significance:

circ2082-dependent signatures correlate with favorable outcomes in patients with glioblastoma.

Description:

circ2082 (hsa_circ_0002082), derived from MALAT1, is up-regulated in glioblastoma GSCs and forms a nuclear complex with RBM3 and DICER. This complex retains DICER in the nucleus and contributes to impaired microRNA maturation and microRNAome suppression; circ2082 knockdown relocalizes DICER to the cytosol, restores the microRNAome, and reduces tumorigenicity in vitro and in xenograft models, with links to favorable patient outcomes.

Confidence score:

0.8208

Other information
Title:

The nuclear DICER-circular RNA complex drives the deregulation of the glioblastoma cell microRNAome.

Journal: Science advances
Published: 2020
PubMed ID: 33328224
Study type:

combined biological and clinical study

Data availability: -
Code availability: -