circRNA basic information
circBase ID: hsa_circ_0001414
Name: hsa_circ_TMEM165
Synonym: circTMEM165 / circ-TMEM165
Host Gene: TMEM165
Genomic location(hg19): chr4:56277780-56284152:+
Genomic location(hg38): chr4:55411613-55417985:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005068
MONDO name: myocardial infarction
Disease details: myocardial infarction / MI
Disease DO ID:
5844
Disease MeSH ID:
D009203
Disease NCIt ID:
C27996
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

peripheral blood

Cell lines:

AC16

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: GREM1
Associated microRNA: hsa-miR-103b, hsa-miR-1255b-2-3p, hsa-miR-1323, hsa-miR-548a-3p, hsa-miR-1251-5p
Biological function: -
Molecular mechanism: Predicted ceRNA (miRNA sponge) network involvement in MI
Biological pathway or process:

ceRNA regulation (other); other pathway/process (other)

Detected method:
Q
S
Validation methods:

circRNA-seq; RNase R Treatment; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis; RNA-seq

Clinical significance:

ROC curves uncovered that they have great sensitivity and specificity in the determination of MI.

Description:

circTMEM165 is up-regulated in peripheral blood of MI patients and was validated by RT-qPCR. The study predicts a ceRNA mechanism where circTMEM165 may sponge hsa-miR-548a-3p to influence GREM1-related processes, and it shows diagnostic potential via ROC analysis.

Confidence score:

0.6957

Other information
Title:

The Particular Expression Profiles of Circular RNA in Peripheral Blood of Myocardial Infarction Patients by RNA Sequencing.

Journal: Frontiers in cardiovascular medicine
Published: 2022
PubMed ID: 35734281
Study type:

combined biological and clinical study

Data availability: https://www.frontiersin.org/articles/10.3389/fcvm.2022.810257/full#supplementary-material
Code availability: -