circRNA basic information
circBase ID: hsa_circ_0089172
Name: hsa_circ_NUP214
Synonym: circNUP214
Host Gene: NUP214
Genomic location(hg19): chr9:134049441-134053797:+
Genomic location(hg38): chr9:131174054-131178410:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008383
MONDO name: rheumatoid arthritis
Disease details: rheumatoid arthritis / RA
Disease DO ID:
7148
Disease MeSH ID:
D001172
Disease NCIt ID:
C2884
Disease ICD11 ID:
576319925
Disease OMIM ID:
180300
Species: Human
Species details: Homo sapiens
Tissue specimen:

peripheral blood; PBMCs

Cell lines:

HEK293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: IL-23R
Associated microRNA: miR-125a-3p
Biological function: promotes the Th17 cell response; increases IL-17A expression; promotes IL-23R expression
Molecular mechanism: circNUP214 acts as a ceRNA sponge for miR-125a-3p, thereby regulating IL-23R and promoting Th17/IL-17A responses.
Biological pathway or process:

immune regulation (promotes); ceRNA regulation (promotes); proliferation (other)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; Transfection; Luciferase Reporter Assay; Flow Cytometry(Non-apoptosis/cycle); Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

circNUP214 could potentially differentiate RA patients from healthy subjects (AUC = 0.76).

Description:

circNUP214 is up-regulated in PBMCs from rheumatoid arthritis patients and is mainly cytoplasmic. It promotes Th17/IL-17A responses by regulating IL-23R, at least partly by acting as a ceRNA sponge for miR-125a-3p, and shows potential diagnostic value by ROC analysis.

Confidence score:

0.8195

Other information
Title:

Circular RNA circNUP214 Modulates the T Helper 17 Cell Response in Patients With Rheumatoid Arthritis.

Journal: Frontiers in immunology
Published: 2022
PubMed ID: 35686126
Study type:

combined biological and clinical study

Data availability: Supplementary Material: https://www.frontiersin.org/articles/10.3389/fimmu.2022.885896/full#supplementary-material
Code availability: -