circRNA basic information
circBase ID: hsa_circ_0039216
Name: hsa_circ_GPT2
Synonym: hsa-circRNA-101802
Host Gene: GPT2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0011719
MONDO name: gastrointestinal stromal tumor
Disease details: gastrointestinal stromal tumor / GIST
Disease DO ID:
 9253
Disease MeSH ID:
 D046152
Disease NCIt ID:
 C3868
Disease ICD11 ID:
 -
Disease OMIM ID:
 606764
Species: Human
Species details: Homo sapiens
Tissue specimen:

GIST tissues; normal gastric tissues
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
UN
Associated gene: ATP1A2
Associated microRNA: hsa-miR-338-3p
Biological function: may have an important role in regulating the progress of GIST
Molecular mechanism: putative ceRNA axis via hsa-miR-338-3p to regulate ATP1A2
Biological pathway or process:

ceRNA regulation (other)
Detected method:
M
Validation methods:

Microarray; Bioinformatics Analysis
Clinical significance:

-
Description:

hsa-circ-0039216 is implicated in GIST through a predicted ceRNA axis with hsa-miR-338-3p and ATP1A2 constructed from microarray and in-silico target predictions. This circRNA was not experimentally validated by qRT-PCR in the paper.
Confidence score:

0.1768
Other information
Title:

Potential Value of Circular RNA circTBC1D4 in Gastrointestinal Stromal Tumors.

Journal: Journal of immunology research
Published: 2022
PubMed ID: 35655923
Study type:

bioinformatics study
Data availability: GSE131481; GSE147303; GSE13861
Code availability: -